Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq5 246 6e-60 seq15 178 2e-39 >seq5 Length=1078720 Score = 246 bits (272), Expect = 6e-60 Identities = 458/669 (68%), Gaps = 20/669 (3%) Strand=Plus/Minus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 |||| |||||| || || ||||| || | | || ||||| | || ||||| || | | Sbjct 587951 GCCAAGTTGCAAACAGCGACCTCATCAGGGGCGGAGTACTCAATGATTTCGGTACACAAG 587892 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 ||||| | ||||| || || || || || || ||||||||||| ||| || |||||| Sbjct 587891 TTACTCGATTTGATAGTACCGAGATGTTGCTGGTTGGACTTGGCATTGGCAGCATCCTTG 587832 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867 || ||||||||||| ||||||||| || || |||||| | ||| || | | Sbjct 587831 TAAAGCATGAAGGGGTTACCGGTCTCGGTTTGAGCCTCGAGGATGGCAAACCAAAGTTTC 587772 Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGT-GTACAGGGCCTC 244926 || |||| ||| ||||| |||| || | |||||| || | ||| || || Sbjct 587771 TGGGCTTTGATGGTCTTGCGACCCTTACCGGCCTTCTCGTA-CGACTCGTAGAGCTTTTC 587713 Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCA 244986 ||||| | ||| ||| | ||||| |||||| ||||| ||||| ||| |||| Sbjct 587712 AAACTCTTCGGAGTGGACATCGGCGAGGCCTGGGCACTCGGCCGGACACATCAGAGTCCA 587653 Query 244987 CTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAG 245046 |||||| || | ||| | || ||||||||| ||||| ||||| ||||| | ||| | Sbjct 587652 GTCGCCGTCGGATTCGACACGCTTCATGAAGAGATCGGGAATCCAAAGGGCGTAGAACAA 587593 Query 245047 GTCCCT-----GGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCA 245101 ||| || || | || || |||| | |||||| | || |||| ||||| Sbjct 587592 GTCTCTTGCTCGGACTTCCTCTTTTCCGTG-----GTTCTTACGCAAGTCCAGGAAGTCG 587538 Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161 ||||| ||| | ||||| ||||| | ||||| || | ||| ||||| |||||||| || Sbjct 587537 AAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTACCA 587478 Query 245162 CCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCC 245217 || ||||| | | | ||||| |||| ||| ||||| | || || || || Sbjct 587477 CCTTGGTCGA----CGTAACGAGCTGTGGCGTCAAAGGCTCGCAGCATGGGGACGATACC 587422 Query 245218 GTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGA 245277 |||||||| |||||||||||| ||||| | |||||| | | || |||| |||| Sbjct 587421 GTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACGGATGTTGTGGATGTG 587362 Query 245278 CATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTAT 245337 | || | || |||||| ||||||||| | || ||| |||||| ||||| || Sbjct 587361 GAGACCAATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTTGAGAGTGTCGTAGAT 587302 Query 245338 GCCCTCCAT 245346 |||||| || Sbjct 587301 GCCCTCAAT 587293 >seq15 Length=579413 Score = 178 bits (196), Expect = 2e-39 Identities = 252/347 (73%), Gaps = 13/347 (4%) Strand=Plus/Plus Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||||||| ||| || ||| || |||| |||||| ||| |||| | Sbjct 218255 GAGAACATCCACTCTGAGACCTACTCCCTCCTGATCGACACCTACATCAAGGACCCCGCC 218314 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 || | || ||| | ||||| || || || |||||||| ||||| || || Sbjct 218315 CGCCGGACTTACCTCTTCGAAGCCATCGACACCATCCCCTGCATTGCCAAGAAAGCCAAC 218374 Query 42657 TGGGCGCTCAACTGGATC---GA-GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 ||||| ||||| |||||| || ||| ||| | || || | ||| | || | || Sbjct 218375 TGGGCTCTCAAGTGGATCTCTGATGAG---CGAT-CGACCTTTGCCGAACGACTAATCGC 218430 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 |||| ||||||| ||||| ||||||||||| || ||||||| |||||||||||||| || Sbjct 218431 CTTTGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTGAA 218490 Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || ||| || ||||||||| | |||||||| ||||| |||||| | | ||||||| Sbjct 218491 GAAGCGTGGTCTC-ATGCCCGGATTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGG 218549 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGG 42878 | ||||| | ||||| || || ||||| ||| | |||||| ||| Sbjct 218550 GTCTGCACACCGACTTCGCATGTCTCCTATTC---ACCCACCTGAGG 218593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338515354080