Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq5 246 6e-60
seq15 178 2e-39
>seq5
Length=1078720
Score = 246 bits (272), Expect = 6e-60
Identities = 458/669 (68%), Gaps = 20/669 (3%)
Strand=Plus/Minus
Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747
|||| |||||| || || ||||| || | | || ||||| | || ||||| || | |
Sbjct 587951 GCCAAGTTGCAAACAGCGACCTCATCAGGGGCGGAGTACTCAATGATTTCGGTACACAAG 587892
Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807
||||| | ||||| || || || || || || ||||||||||| ||| || ||||||
Sbjct 587891 TTACTCGATTTGATAGTACCGAGATGTTGCTGGTTGGACTTGGCATTGGCAGCATCCTTG 587832
Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867
|| ||||||||||| ||||||||| || || |||||| | ||| || | |
Sbjct 587831 TAAAGCATGAAGGGGTTACCGGTCTCGGTTTGAGCCTCGAGGATGGCAAACCAAAGTTTC 587772
Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGT-GTACAGGGCCTC 244926
|| |||| ||| ||||| |||| || | |||||| || | ||| || ||
Sbjct 587771 TGGGCTTTGATGGTCTTGCGACCCTTACCGGCCTTCTCGTA-CGACTCGTAGAGCTTTTC 587713
Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCA 244986
||||| | ||| ||| | ||||| |||||| ||||| ||||| ||| ||||
Sbjct 587712 AAACTCTTCGGAGTGGACATCGGCGAGGCCTGGGCACTCGGCCGGACACATCAGAGTCCA 587653
Query 244987 CTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAG 245046
|||||| || | ||| | || ||||||||| ||||| ||||| ||||| | ||| |
Sbjct 587652 GTCGCCGTCGGATTCGACACGCTTCATGAAGAGATCGGGAATCCAAAGGGCGTAGAACAA 587593
Query 245047 GTCCCT-----GGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCA 245101
||| || || | || || |||| | |||||| | || |||| |||||
Sbjct 587592 GTCTCTTGCTCGGACTTCCTCTTTTCCGTG-----GTTCTTACGCAAGTCCAGGAAGTCG 587538
Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161
||||| ||| | ||||| ||||| | ||||| || | ||| ||||| |||||||| ||
Sbjct 587537 AAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTACCA 587478
Query 245162 CCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCC 245217
|| ||||| | | | ||||| |||| ||| ||||| | || || || ||
Sbjct 587477 CCTTGGTCGA----CGTAACGAGCTGTGGCGTCAAAGGCTCGCAGCATGGGGACGATACC 587422
Query 245218 GTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGA 245277
|||||||| |||||||||||| ||||| | |||||| | | || |||| ||||
Sbjct 587421 GTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACGGATGTTGTGGATGTG 587362
Query 245278 CATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTAT 245337
| || | || |||||| ||||||||| | || ||| |||||| ||||| ||
Sbjct 587361 GAGACCAATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTTGAGAGTGTCGTAGAT 587302
Query 245338 GCCCTCCAT 245346
|||||| ||
Sbjct 587301 GCCCTCAAT 587293
>seq15
Length=579413
Score = 178 bits (196), Expect = 2e-39
Identities = 252/347 (73%), Gaps = 13/347 (4%)
Strand=Plus/Plus
Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596
|||||| | ||||||||| ||| || ||| || |||| |||||| ||| |||| |
Sbjct 218255 GAGAACATCCACTCTGAGACCTACTCCCTCCTGATCGACACCTACATCAAGGACCCCGCC 218314
Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656
|| | || ||| | ||||| || || || |||||||| ||||| || ||
Sbjct 218315 CGCCGGACTTACCTCTTCGAAGCCATCGACACCATCCCCTGCATTGCCAAGAAAGCCAAC 218374
Query 42657 TGGGCGCTCAACTGGATC---GA-GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712
||||| ||||| |||||| || ||| ||| | || || | ||| | || | ||
Sbjct 218375 TGGGCTCTCAAGTGGATCTCTGATGAG---CGAT-CGACCTTTGCCGAACGACTAATCGC 218430
Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772
|||| ||||||| ||||| ||||||||||| || ||||||| |||||||||||||| ||
Sbjct 218431 CTTTGCCGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTGAA 218490
Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
| || ||| || ||||||||| | |||||||| ||||| |||||| | | |||||||
Sbjct 218491 GAAGCGTGGTCTC-ATGCCCGGATTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGG 218549
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGG 42878
| ||||| | ||||| || || ||||| ||| | |||||| |||
Sbjct 218550 GTCTGCACACCGACTTCGCATGTCTCCTATTC---ACCCACCTGAGG 218593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338515354080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |