Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5 129 7e-25 seq15 125 9e-24 >seq5 Length=1078720 Score = 129 bits (142), Expect = 7e-25 Identities = 482/753 (64%), Gaps = 21/753 (3%) Strand=Plus/Minus Query 114463 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 114522 ||| || || | || |||| || || |||| | |||||| | | |||||| || Sbjct 587967 AGGGAGAGCCAGGGATGCCAAGTTGCAAACAGCGACCTCATCAGGGGCGGAGTACTCAAT 587908 Query 114523 AATTTCCGTACACAAATTTGAACTC---TTAATGGTGCCCAAGTTCTTTTGATTTGACTT 114579 ||||| |||||||| || |||| || || || || | | | || || ||||| Sbjct 587907 GATTTCGGTACACAAGTT---ACTCGATTTGATAGTACCGAGATGTTGCTGGTTGGACTT 587851 Query 114580 TGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAG 114639 | || |||||||||||||||||| | || | || ||||| ||||| | || ||| Sbjct 587850 GGCATTGGCAGCATCCTTGTAAAGCATGAAGGGGTTACCGGTCTCGGTTTGAGCCTCGAG 587791 Query 114640 AATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT------CCTC 114693 || || ||| | | |||| | ||| ||| || |||| ||| Sbjct 587790 GATGGCAAACCAAAGTTTCTGGGCTTTGA---TGGTCTTG---CGACCCTTACCGGCCTT 587737 Query 114694 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 114753 ||||||| |||||| |||||||||||| | | || | ||| ||||| Sbjct 587736 CTCGTACGACTCGTAGAGCTTTTCAAACTCTTCGGAGTGGACATCGGCGAGGCCTGGGCA 587677 Query 114754 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTC 114813 || | || || | |||| ||| | || | || ||||||||||||||||| || Sbjct 587676 CTCGGCCGGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATGAAGAGATC 587617 Query 114814 TGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 114873 || ||||| || || |||| | || | || |||| || | || || || Sbjct 587616 GGGAATCCAAAGGGCGTAGAACAAGTCTCTTGCTCGGACTTCCTCTTTTCCGTGGTTCTT 587557 Query 114874 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 114933 |||||| |||| ||||| | || ||| || ||||| || || ||||| | || | | Sbjct 587556 ACGCAAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGC 587497 Query 114934 CCCCTTACGACG---ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAG 114990 || || |||| | |||| || || | |||||||| | ||| | || || Sbjct 587496 ACCGGGGCGCTTGTTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAG 587437 Query 114991 CATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCT 115050 ||| || | |||||| | ||| | ||| || || || ||| || ||||| | Sbjct 587436 CATGGGGACGATACCGTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACG 587377 Query 115051 GACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGT 115110 || | |||||||| | ||||||||| || || ||| ||||| || || || | | Sbjct 587376 GATGTTGTGGATGTGGAGACCAATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTT 587317 Query 115111 GAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGA 115170 |||| || ||||||| || || || |||||| || | |||| ||||| || || Sbjct 587316 GAGAGTGTCGTAGATGCCCTCAATAGAGTCATCCCGCATGGCGACGAGGAAACATGAAGA 587257 Query 115171 CATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 115203 ||| || | || |||||||||||||| || Sbjct 587256 CATCTGAGCGTGAGGAGTACCAGCGTTGAAAAG 587224 >seq15 Length=579413 Score = 125 bits (138), Expect = 9e-24 Identities = 169/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| ||||||||||| ||||||||||| || || |||||| || ||| ||||||||||| Sbjct 218557 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACC 218498 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| |||||| || | | || ||||| ||||||||||| ||||| || Sbjct 218497 ACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 218438 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAG---GAGCGCGACTTTGTGTCAAACCACTTCAT 126234 || || || | || || || |||||| || ||| | | | | |||||| | Sbjct 218437 GGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCGCTCATCAGAG---ATCCACTTGAG 218381 Query 126235 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288 ||||| | || || || | || || |||| ||| | ||| ||||| ||||| Sbjct 218380 AGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCGAAGAG 218327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353166918640