Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5 156 4e-33 >seq5 Length=1078720 Score = 156 bits (172), Expect = 4e-33 Identities = 479/739 (65%), Gaps = 24/739 (3%) Strand=Plus/Plus Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 || |||||||| || || || | ||||||||||| |||||||| | | | | Sbjct 587224 CTTTTCAACGCTGGTACTCCTCACGCTCAGATGTCTTCATGTTTCCTCGTCGCCATGCGG 587283 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | ||||| || || || | ||||| |||||| |||||| ||||| || | Sbjct 587284 GATGACTCTATTGAGGGCATCTACGACACTCTCAAGACCTGTGCTCAGATCTCCAAGACC 587343 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || || || || ||||| || | ||||||| |||||| ||||| ||| Sbjct 587344 GCCGGTGGTATTGGTCTCCACATCCACAACATCCGTGCCAAGGGTTCATACATTGCCGGC 587403 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 ||||| ||| ||| ||||| ||||||| ||||| || | ||| || | | || || Sbjct 587404 ACCAACGGCTACTCTAACGGTATCGTCCCCATGCTGCGAGCCTTTGACGCCACAGCTCGT 587463 Query 94144 TACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGG 94203 ||||| ||||| |||||| | | | ||| | || || |||| || ||||| ||| Sbjct 587464 TACGTCGACCAAGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCTTGG 587523 Query 94204 CACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGG 94263 || || || || | ||| | ||| |||| ||||||||||| || || | | Sbjct 587524 CATGCCGATGTCTTCGACTTCCTGGACTTGCGTAAGAACCACGGAAAAGAGGAAGTCCGA 587583 Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323 || |||||| | |||||||| || ||| | || || || || ||||| || ||||| Sbjct 587584 GCAAGAGACTTGTTCTACGCCCTTTGGATTCCCGATCTCTTCATGAAGCGTGTCGAATCC 587643 Query 94324 AACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGA 94383 || || ||||| ||| | ||||| || || || || || |||| || Sbjct 587644 GACGGCGACTGGACTCTGATGTGTCCGGCCGAGTGCCCAGGCCTCGCCGATGT------- 587696 Query 94384 TCGCGTTTTGAAGACTT--GTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTT- 94440 | | ||||| || | |||| ||||| ||| | | |||||| | |||| | Sbjct 587697 --CCACTCCGAAGAGTTTGAAAAGCTC--TACGAGTCGTACGAGAAGGCCGGTAAGGGTC 587752 Query 94441 --------ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 || | || ||| || ||| | ||| | || | || ||||| | Sbjct 587753 GCAAGACCATCAAAGCCCAGAAACTTTGGTTTGCCATCCTCGAGGCTCAAACCGAGACCG 587812 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 ||| |||| ||| | | |||||| ||| ||| ||||||||||||||||| || |||| Sbjct 587813 GTAACCCCTTCATGCTTTACAAGGATGCTGCCAATGCCAAGTCCAACCAGCAACATCTCG 587872 Query 94553 GGGTGATCAAGAGCTCG-AATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 | ||||| | | | || |||| ||||| || | ||||| | | || || ||| Sbjct 587873 GTACTATCAA-ATCGAGTAACTTGTGTACCGAAATCATTGAGTACTCCGCCCCTGATGAG 587931 Query 94612 ATTGCTGTGTGTAACCTGG 94630 | ||||| || ||| ||| Sbjct 587932 GTCGCTGTTTGCAACTTGG 587950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722841325680