Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 7e-18
seq15 98.7 1e-15
>seq1
Length=3245857
Score = 105 bits (116), Expect = 7e-18
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| | ||| || | || | | | |||||||| || ||||||||||||
Sbjct 3091582 CCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3091523
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| |||||||| |||||||| | | |||| |||||||||||||| || ||
Sbjct 3091522 AGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGG 3091463
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| || ||||| ||| || || | | || | |||||| | ||||| |||
Sbjct 3091462 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACC 3091403
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAG 138593
|||| || | ||||| || || ||
Sbjct 3091402 TCGAGGGTGATGGTTTTGCCCGTAAG 3091377
>seq15
Length=579413
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||||| || | ||| | | |||||||| || || |||||||| |
Sbjct 37868 CCACCACGGAGACGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGAC 37927
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| ||| ||||| | || || |||| |||| |||||||| ||||| || ||
Sbjct 37928 AAAGTGCGCCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 37987
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| || ||||| |||||| ||| | ||||| | | ||| || | ||||||||
Sbjct 37988 ATACCCTCCTTGTCCTGGATTTTGGATTTCACATTGT-CTATGGTATCCGAAGACTCCAC 38046
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || || || ||||| || || || ||||||||
Sbjct 38047 CTCAAGAGTAATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| || || || |||||||| | || || ||| || || || || ||||
Sbjct 38129 GACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCCAGCTGCTTTCCGGCG 38188
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT--A 138538
|||| |||||||||||||| || || ||||| |||||||| ||| | || | |||
Sbjct 38189 AAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTC-CTGAATCTTCGATTTCAC 38247
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
|||| || | |||||| | ||||| ||||| | || | || || || || ||||| |
Sbjct 38248 ATTG-TCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTTCCGGTAAGAGTCT 38306
Query 138599 TTACAAAAATCTGCAT 138614
| || || ||||||||
Sbjct 38307 TGACGAAGATCTGCAT 38322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262040209760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |