Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 1e-19
seq15 98.7 9e-16
seq12 84.2 2e-11
>seq1
Length=3245857
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || || | |||||||| || | |||||||| || || || ||||| |||
Sbjct 3091585 GCACCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCG 3091526
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| || || ||| || |||||||| ||||| |||| | ||||| || || ||
Sbjct 3091525 GAGAGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGG 3091466
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062
|| || |||||||||||| ||| || ||||| |||| |||| |||||||| | |||
Sbjct 3091465 GGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCGATGGTGTCCGAAGACTC 3091407
Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAG 127092
|| |||| ||| | |||||||| || ||
Sbjct 3091406 AACCTCGAGGGTGATGGTTTTGCCCGTAAG 3091377
>seq15
Length=579413
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| || | ||| | |||||||| || || |||||||| || |
Sbjct 37868 CCACCACGGAGACGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGAC 37927
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || | ||| || || ||| |||||| |||||||| || || ||
Sbjct 37928 AAAGTGCGCCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 37987
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| |||||| || | | || | ||| |||| | ||| ||
Sbjct 37988 ATACCCTCCTTGTCCTGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACC 38047
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || ||||| ||||| || || || ||||||||
Sbjct 38048 TCAAGAGTAATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094
Score = 95.1 bits (104), Expect = 1e-14
Identities = 116/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| ||||||||| | ||||| ||||| || || ||||| ||||||||||||
Sbjct 38444 TCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATGCCCTCCTTG 38503
Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
||| || || ||||| |||| |||| |||||| | |||||| || | || |
Sbjct 38504 TCCTGAATCTTGGACTTGACGTTG-TCGATGGTGTCTGAGGACTCGACCTCCAGAGTGAT 38562
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||||||| || || || || || || |||||
Sbjct 38563 GGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCAT 38598
>seq12
Length=702644
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || |||||||| || ||| | |||||||||||||| || || || || ||||| |||
Sbjct 575066 TCCTCGAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGGATACCCTCTTTG 575007
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| |||||| |||| | |||| ||||||| | |||||| |||| ||| |
Sbjct 575006 TCCTGGATTTTGGATTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATG 574947
Query 127079 GTTTTGCCGGTCAG 127092
|| ||||| || ||
Sbjct 574946 GTCTTGCCCGTGAG 574933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500455261920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |