Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 seq15 98.7 9e-16 seq12 84.2 2e-11 >seq1 Length=3245857 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || || | |||||||| || | |||||||| || || || ||||| ||| Sbjct 3091585 GCACCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCG 3091526 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || || ||| || |||||||| ||||| |||| | ||||| || || || Sbjct 3091525 GAGAGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGG 3091466 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062 || || |||||||||||| ||| || ||||| |||| |||| |||||||| | ||| Sbjct 3091465 GGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCGATGGTGTCCGAAGACTC 3091407 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 || |||| ||| | |||||||| || || Sbjct 3091406 AACCTCGAGGGTGATGGTTTTGCCCGTAAG 3091377 >seq15 Length=579413 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | |||||||| || || |||||||| || | Sbjct 37868 CCACCACGGAGACGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGAC 37927 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| || || ||| |||||| |||||||| || || || Sbjct 37928 AAAGTGCGCCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 37987 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| |||||| || | | || | ||| |||| | ||| || Sbjct 37988 ATACCCTCCTTGTCCTGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACC 38047 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||| ||||| || || || |||||||| Sbjct 38048 TCAAGAGTAATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094 Score = 95.1 bits (104), Expect = 1e-14 Identities = 116/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| ||||||||| | ||||| ||||| || || ||||| |||||||||||| Sbjct 38444 TCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATGCCCTCCTTG 38503 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| || || ||||| |||| |||| |||||| | |||||| || | || | Sbjct 38504 TCCTGAATCTTGGACTTGACGTTG-TCGATGGTGTCTGAGGACTCGACCTCCAGAGTGAT 38562 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||||||| || || || || || || ||||| Sbjct 38563 GGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCAT 38598 >seq12 Length=702644 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || |||||||| || ||| | |||||||||||||| || || || || ||||| ||| Sbjct 575066 TCCTCGAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGGATACCCTCTTTG 575007 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| |||||| |||| | |||| ||||||| | |||||| |||| ||| | Sbjct 575006 TCCTGGATTTTGGATTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATG 574947 Query 127079 GTTTTGCCGGTCAG 127092 || ||||| || || Sbjct 574946 GTCTTGCCCGTGAG 574933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500455261920