Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq15 123 3e-23
seq5 120 4e-22
seq6 91.5 2e-13
>seq15
Length=579413
Score = 123 bits (136), Expect = 3e-23
Identities = 171/237 (72%), Gaps = 12/237 (5%)
Strand=Plus/Minus
Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590
||| ||||||||||| ||||||||||| || || |||||| || || |||||||||||
Sbjct 218557 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACC 218498
Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650
|||||||||| |||||| || | | || || || ||||||||||| ||||| ||
Sbjct 218497 ACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 218438
Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAG---GAGCGGGACTTTGTATCA---AACCACTT 127704
|| || || | ||| || ||||||||| || || || |||| | ||||||
Sbjct 218437 GGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCG---CT---CATCAGAGATCCACTT 218384
Query 127705 CATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAG 127761
| ||||| | || || || | || || |||| ||| | ||| ||||| |||||
Sbjct 218383 GAGAGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCGAAGAG 218327
>seq5
Length=1078720
Score = 120 bits (132), Expect = 4e-22
Identities = 480/753 (64%), Gaps = 21/753 (3%)
Strand=Plus/Minus
Query 116424 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 116483
||| || || | || |||| || || |||| | |||||| | | |||||| ||
Sbjct 587967 AGGGAGAGCCAGGGATGCCAAGTTGCAAACAGCGACCTCATCAGGGGCGGAGTACTCAAT 587908
Query 116484 AATTTCCGTACACAAATTTGAACTC---TTAATGGTGCCCAAGTTCTTTTGATTTGACTT 116540
||||| |||||||| || |||| || || || || | | | || || |||||
Sbjct 587907 GATTTCGGTACACAAGTT---ACTCGATTTGATAGTACCGAGATGTTGCTGGTTGGACTT 587851
Query 116541 TGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAG 116600
| || ||||||||||| ||||| | || | || ||||| ||||| | || |||
Sbjct 587850 GGCATTGGCAGCATCCTTGTAAAGCATGAAGGGGTTACCGGTCTCGGTTTGAGCCTCGAG 587791
Query 116601 AATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT------CCTC 116654
|| || ||| | | |||| | ||| ||| || |||| |||
Sbjct 587790 GATGGCAAACCAAAGTTTCTGGGCTTTGA---TGGTCTTG---CGACCCTTACCGGCCTT 587737
Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGC 116714
||||||| |||||| ||||||||||| | || | ||| |||||
Sbjct 587736 CTCGTACGACTCGTAGAGCTTTTCAAACTCTTCGGAGTGGACATCGGCGAGGCCTGGGCA 587677
Query 116715 CTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 116774
|| | ||||| | |||| ||| | || | || || |||||||||||||| ||
Sbjct 587676 CTCGGCCGGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATGAAGAGATC 587617
Query 116775 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 116834
|| ||||| || || |||| | || | || |||| || | || || ||
Sbjct 587616 GGGAATCCAAAGGGCGTAGAACAAGTCTCTTGCTCGGACTTCCTCTTTTCCGTGGTTCTT 587557
Query 116835 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 116894
|||||| |||| ||||| | || ||| || ||||| || || ||||| | || | |
Sbjct 587556 ACGCAAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGC 587497
Query 116895 CCCCTTGCGACG---ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAG 116951
|| ||| |||| | |||| || || | || || |||| ||| | || ||
Sbjct 587496 ACCGGGGCGCTTGTTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAG 587437
Query 116952 CATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCT 117011
||| || | |||||| | ||| | ||| || || || ||| || ||||| |
Sbjct 587436 CATGGGGACGATACCGTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACG 587377
Query 117012 GACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGT 117071
|| | ||||||||| | ||||||||| || || ||| ||||| || || || | |
Sbjct 587376 GATGTTGTGGATGTGGAGACCAATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTT 587317
Query 117072 GAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGA 117131
|||| || ||||||| || || || |||||| || | |||| |||||| || ||
Sbjct 587316 GAGAGTGTCGTAGATGCCCTCAATAGAGTCATCCCGCATGGCGACGAGGAAACATGAAGA 587257
Query 117132 CATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 117164
||| || | || |||||||||||||| ||
Sbjct 587256 CATCTGAGCGTGAGGAGTACCAGCGTTGAAAAG 587224
>seq6
Length=994530
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 12873 TTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACT 12932
||||||| |||||| || ||||| ||||| | ||||||||| || || || |
Sbjct 407725 TTACCGATGGCGTCGATCTCGTCGATGAAGATGATACACGGCGCATGTTTCTTTGCGTTT 407784
Query 12933 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCG 12992
|||||| |||||| ||||| | ||||||||| ||||||||||||||||| | ||
Sbjct 407785 GCAAAGAGATCTCGAACTCTGGAAGGACCGACACCGACAAACATCTCCACAAATTCGGAA 407844
Query 12993 GCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 13052
|||| || |||||| || | | ||||| || |||| ||| || |||||
Sbjct 407845 CCGGATACCGAGAGGAAGGGTACCTGAGCCTCACCAGCCGTGGCCTTGGCTAGCAGGGTT 407904
Query 13053 TTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105
|| || || || || || | ||| | || || || ||||| |||| ||
Sbjct 407905 TTACCGGTACCGGGAGGACCAGAGAGGATAGCTCCTCGAGGGATTTTGGCGCC 407957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506755207280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |