Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq15 123 3e-23 seq5 120 4e-22 seq6 91.5 2e-13 >seq15 Length=579413 Score = 123 bits (136), Expect = 3e-23 Identities = 171/237 (72%), Gaps = 12/237 (5%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| ||||||||||| ||||||||||| || || |||||| || || ||||||||||| Sbjct 218557 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACC 218498 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||||| |||||| || | | || || || ||||||||||| ||||| || Sbjct 218497 ACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 218438 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAG---GAGCGGGACTTTGTATCA---AACCACTT 127704 || || || | ||| || ||||||||| || || || |||| | |||||| Sbjct 218437 GGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCG---CT---CATCAGAGATCCACTT 218384 Query 127705 CATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAG 127761 | ||||| | || || || | || || |||| ||| | ||| ||||| ||||| Sbjct 218383 GAGAGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCGAAGAG 218327 >seq5 Length=1078720 Score = 120 bits (132), Expect = 4e-22 Identities = 480/753 (64%), Gaps = 21/753 (3%) Strand=Plus/Minus Query 116424 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 116483 ||| || || | || |||| || || |||| | |||||| | | |||||| || Sbjct 587967 AGGGAGAGCCAGGGATGCCAAGTTGCAAACAGCGACCTCATCAGGGGCGGAGTACTCAAT 587908 Query 116484 AATTTCCGTACACAAATTTGAACTC---TTAATGGTGCCCAAGTTCTTTTGATTTGACTT 116540 ||||| |||||||| || |||| || || || || | | | || || ||||| Sbjct 587907 GATTTCGGTACACAAGTT---ACTCGATTTGATAGTACCGAGATGTTGCTGGTTGGACTT 587851 Query 116541 TGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAG 116600 | || ||||||||||| ||||| | || | || ||||| ||||| | || ||| Sbjct 587850 GGCATTGGCAGCATCCTTGTAAAGCATGAAGGGGTTACCGGTCTCGGTTTGAGCCTCGAG 587791 Query 116601 AATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT------CCTC 116654 || || ||| | | |||| | ||| ||| || |||| ||| Sbjct 587790 GATGGCAAACCAAAGTTTCTGGGCTTTGA---TGGTCTTG---CGACCCTTACCGGCCTT 587737 Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGC 116714 ||||||| |||||| ||||||||||| | || | ||| ||||| Sbjct 587736 CTCGTACGACTCGTAGAGCTTTTCAAACTCTTCGGAGTGGACATCGGCGAGGCCTGGGCA 587677 Query 116715 CTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 116774 || | ||||| | |||| ||| | || | || || |||||||||||||| || Sbjct 587676 CTCGGCCGGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATGAAGAGATC 587617 Query 116775 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 116834 || ||||| || || |||| | || | || |||| || | || || || Sbjct 587616 GGGAATCCAAAGGGCGTAGAACAAGTCTCTTGCTCGGACTTCCTCTTTTCCGTGGTTCTT 587557 Query 116835 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 116894 |||||| |||| ||||| | || ||| || ||||| || || ||||| | || | | Sbjct 587556 ACGCAAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGC 587497 Query 116895 CCCCTTGCGACG---ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAG 116951 || ||| |||| | |||| || || | || || |||| ||| | || || Sbjct 587496 ACCGGGGCGCTTGTTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAG 587437 Query 116952 CATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCT 117011 ||| || | |||||| | ||| | ||| || || || ||| || ||||| | Sbjct 587436 CATGGGGACGATACCGTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACG 587377 Query 117012 GACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGT 117071 || | ||||||||| | ||||||||| || || ||| ||||| || || || | | Sbjct 587376 GATGTTGTGGATGTGGAGACCAATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTT 587317 Query 117072 GAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGA 117131 |||| || ||||||| || || || |||||| || | |||| |||||| || || Sbjct 587316 GAGAGTGTCGTAGATGCCCTCAATAGAGTCATCCCGCATGGCGACGAGGAAACATGAAGA 587257 Query 117132 CATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 117164 ||| || | || |||||||||||||| || Sbjct 587256 CATCTGAGCGTGAGGAGTACCAGCGTTGAAAAG 587224 >seq6 Length=994530 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 12873 TTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACT 12932 ||||||| |||||| || ||||| ||||| | ||||||||| || || || | Sbjct 407725 TTACCGATGGCGTCGATCTCGTCGATGAAGATGATACACGGCGCATGTTTCTTTGCGTTT 407784 Query 12933 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCG 12992 |||||| |||||| ||||| | ||||||||| ||||||||||||||||| | || Sbjct 407785 GCAAAGAGATCTCGAACTCTGGAAGGACCGACACCGACAAACATCTCCACAAATTCGGAA 407844 Query 12993 GCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 13052 |||| || |||||| || | | ||||| || |||| ||| || ||||| Sbjct 407845 CCGGATACCGAGAGGAAGGGTACCTGAGCCTCACCAGCCGTGGCCTTGGCTAGCAGGGTT 407904 Query 13053 TTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 || || || || || || | ||| | || || || ||||| |||| || Sbjct 407905 TTACCGGTACCGGGAGGACCAGAGAGGATAGCTCCTCGAGGGATTTTGGCGCC 407957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506755207280