Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq5 91.5 2e-13
>seq5
Length=1078720
Score = 91.5 bits (100), Expect = 2e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908
|||||||| || || | | |||| || | |||| ||||| || ||||| ||
Sbjct 588970 GTGAACTGGATTGCCTGGGCACTAGGCTTGGTCCTCAAGTAGTAGCACCCAGTCTTCAGT 588911
Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATG 203968
||||||| ||| ||||| | ||||||||| | || | | | | |||| || |
Sbjct 588910 CCCTTCTTCCAACCGTAGAAGTGCATGGAGGTCAACTGGGAGAAGGATGGGTTCGCAAGA 588851
Query 203969 TGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATA 204028
|| |||||||| || ||| ||||||||||||| | || || || || | | |||
Sbjct 588850 TGGATGTTCAGGGATTGGGACTGGTCGATGAAAGCACCACGGTCGGCAGCAAGGTCGATG 588791
Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061
| || |||||| || ||||||||||| ||||||
Sbjct 588790 ACGGCCTTCTGGGAGATCTCCCACACGGTCTTG 588758
Score = 87.8 bits (96), Expect = 3e-12
Identities = 256/389 (66%), Gaps = 4/389 (1%)
Strand=Plus/Minus
Query 205127 GGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGTCGCTGATC 205186
||||||||||||| ||| ||| || || | || ||| || || ||| |||
Sbjct 587669 GGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATGAAGAGATCGGGAATC 587610
Query 205187 CACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCAAG 205246
|| ||| |||| |||| || | || | | | | || | ||| ||||||| ||||
Sbjct 587609 CAAAGGGCGTAGAACAAGTCTCTTGCTCGGACTTCCTCTTTTCCGTGGTTCTTACGCAAG 587550
Query 205247 TCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGG 205305
||||| ||| || | | ||||| ||||| ||||| | | | ||| | || || ||
Sbjct 587549 TCCAG-GAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGGG 587491
Query 205306 CCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGG 205365
| |||||| ||||| ||||| || |||| | |||| || |||||||||| ||
Sbjct 587490 GCGCTTGTTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAGCATGGG 587431
Query 205366 CACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCTCACGTT 205425
|| | |||||| | | ||||| |||| | ||| || || | || | | |||
Sbjct 587430 GACGATACCGTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACGGATGTT 587371
Query 205426 GGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCA-CTCTTGCAGAG 205484
| |||| ||||| || || | ||||| |||||| || || ||||| ||||
Sbjct 587370 GTGGATGTGGAGACCAATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTTG-AGAG 587312
Query 205485 TGCTGTAGATGCCTGCGATGGAATCGTCC 205513
|| ||||||||| | || || || |||
Sbjct 587311 TGTCGTAGATGCCCTCAATAGAGTCATCC 587283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154623512480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |