Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq15 127 5e-24 seq1 107 5e-18 >seq15 Length=579413 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||| ||||| || || ||||||| ||||||||| | | |||| Sbjct 37589 CGAAGACGGAGGACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTC 37648 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||| |||| |||||| ||||| ||||| | | ||| ||||| || ||| || Sbjct 37649 CTTCCATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATGCCC 37708 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || || ||||||| |||| ||| || | | ||| || |||| Sbjct 37709 TCCTTGTCCTGGATTTTCGACTTCACGTTGTCGATGGTATCAGACGATTCAACCTCCAGT 37768 Query 199589 GTGATCGTCTTACCCGTGAG 199608 ||||| ||||| ||||| || Sbjct 37769 GTGATGGTCTTTCCCGTTAG 37788 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || |||||||| || |||| |||||||| | | || | || ||| Sbjct 38111 AGGACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCT 38170 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||||||||||||||| |||||||| ||||| || || || ||| ||| Sbjct 38171 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCC 38230 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||| |||| |||||| | | || || || | ||||| ||| Sbjct 38231 TGAATCTTCGATTTCACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTC 38290 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || || || Sbjct 38291 TTTCCGGTAAGAGTCTTGACGAAGATCTG 38319 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||||||||| || || || |||||||| |||| |||||||| | |||||| Sbjct 37874 CGGAGACGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGACAAAGTG 37933 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||| |||||| ||||||||||| |||||||||||||| || || || Sbjct 37934 CGCCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCC 37993 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || || ||||| || | ||| || | | || || || | Sbjct 37994 TCCTTGTCCTGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACCTCAAGA 38053 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| || || || || || Sbjct 38054 GTAATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTG 38091 Score = 100 bits (110), Expect = 7e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 199452 TGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCT 199511 ||||||| | || || | ||| || || ||||||||||| ||||| || | |||||| | Sbjct 38421 TGTAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTT 38480 Query 199512 GGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTG 199571 |||| ||| ||| || || ||||||||||| ||| ||| |||| |||||||| Sbjct 38481 GGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTG 38540 Query 199572 TTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || || |||| ||||| ||||| || || || || || || || ||||| Sbjct 38541 AGGACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTG 38595 Score = 91.5 bits (100), Expect = 3e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| ||||| ||||||||||| |||||||||||| | | || |||||| |||| ||| Sbjct 37680 ATCTTTGCCGGGAAGCAGTTGGAGGATGGAAGGACTCTTTCGGACTACAACATCCAAAAA 37621 Query 200998 GAGTCTACTCTTCACCTTGT 201017 || |||||||| |||||||| Sbjct 37620 GAATCTACTCTACACCTTGT 37601 Score = 87.8 bits (96), Expect = 4e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || ||||||||||| ||||||||||| ||||| | |||||| | || ||||| ||||| Sbjct 37968 CTGATCTTCGCCGGCAAGCAGTTGGAGGATGGGCGCACTTTGTCGGACTACAATATCCAG 37909 Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017 || |||||||| ||||| ||||| Sbjct 37908 AAGGAGTCTACACTTCATCTTGT 37886 >seq1 Length=3245857 Score = 107 bits (118), Expect = 5e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 |||| || |||||||| || |||||||| |||| ||||||||| | | ||| | |||| Sbjct 3091570 CTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCA 3091511 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 || || ||||| || || || |||||||||||||| ||||| || || || || Sbjct 3091510 TCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTG 3091451 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 ||||| ||||| ||| ||| |||| |||||| | | || || || | ||||| Sbjct 3091450 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATG 3091391 Query 199595 GTCTTACCCGTGAG 199608 || || ||||| || Sbjct 3091390 GTTTTGCCCGTAAG 3091377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920723913886