Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq15 114 1e-20 seq1 107 2e-18 >seq15 Length=579413 Score = 114 bits (126), Expect = 1e-20 Identities = 135/180 (75%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 |||||||||| || || || |||| || |||||||| || ||||| ||||| ||||| | Sbjct 38421 TGTAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTT 38480 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCG 46534 |||| | || | || |||||||||| ||||| ||||| ||| | | | ||||| Sbjct 38481 GGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCT 38539 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || || || |||| |||||||| ||||| || || || ||||| |||||||||||| Sbjct 38540 GAGGACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCATT 38599 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| || ||||| | |||| |||||| |||||||||||||| || | ||||||| | Sbjct 37879 ACGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCC 37938 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || | ||||||||||||||| |||| ||||||||||| | || | | |||||| Sbjct 37939 ATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTT 37998 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||| || || | | | | || || || ||||| || | || || Sbjct 37999 GTCCTGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACCTCAAGAGTAAT 38058 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || || || || || ||||| ||||| Sbjct 38059 GGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || |||||||||||||| || || || || |||| || |||||||| |||||||| Sbjct 38131 CTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCCAGCTGCTTTCCGGCGAA 38190 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||| ||||| | || | | ||| |||||| |||||| || | | Sbjct 38191 GATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCCTGAATCTTCGATTTCACATT 38250 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | |||||||| || || || || || || || Sbjct 38251 GTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGAC 38310 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 38311 GAAGATCTGCAT 38322 >seq1 Length=3245857 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 ||||||||| || | ||| |||||| ||||| ||||||||||| ||||| || | || Sbjct 3091568 CAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCATC 3091509 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||||||| || || || || || | ||||| ||||| | || | | ||||||||| Sbjct 3091508 CTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTGTC 3091449 Query 46501 CATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGG 46559 | |||||| ||||| ||| | | | ||||| || || || || | ||||||| Sbjct 3091448 CTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGG 3091390 Query 46560 TTTTGCCCGTCAG 46572 |||||||||| || Sbjct 3091389 TTTTGCCCGTAAG 3091377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237990202160