Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq15 114 1e-20
seq1 114 1e-20
seq12 95.1 1e-14
>seq15
Length=579413
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || || || |||||||| | || || ||| | |
Sbjct 38322 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAGGTTGAGTCTTCT 38263
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | ||| || || | ||||||||||| || ||| | ||||||
Sbjct 38262 GACACCATCGACAATGTGAAATCGAAGATTCAGGACAAAGAGGGTATCCCCCCAGACCAA 38203
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| || || |||||||| |||| || |||||| ||||||||
Sbjct 38202 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTCTCGGACTACAAT 38143
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||| || || ||||||| || ||||| || |||
Sbjct 38142 ATCCAGAAAGAGTCGACGCTTCACTTGGTCCTCCGT 38107
Score = 100 bits (110), Expect = 3e-16
Identities = 166/238 (70%), Gaps = 4/238 (2%)
Strand=Plus/Minus
Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954
|| || |||||| |||| |||||||| | ||| ||||| |||||| ||| |||||
Sbjct 218571 CATGCGAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAAT 218512
Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014
||||||||||| || || || || ||||| || |||| ||||| || || ||||||
Sbjct 218511 CCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAG 218452
Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCG 133074
| ||||| ||||| || || || | || || ||| | || || | | | | |
Sbjct 218451 ATACCCTCAACGGCGGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCGCTCATCAGAG 218392
Query 133075 ATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTG--ACGCACGGCATCGTTTCGATGGC 133130
||||| || ||||| | ||| |||||| | | ||| || || || ||||||||
Sbjct 218391 ATCCACTTGAGAGCCCAGTTGGC--TTTCTTGGCAATGCAGGGGATGGTGTCGATGGC 218336
Score = 96.9 bits (106), Expect = 3e-15
Identities = 131/180 (73%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||| || || || || ||||| |||||||| | || |||||| || |
Sbjct 38599 AATGCAAATCTTCGTTAAGACCCTTACCGGCAAGACCATCACTCTGGAGGTCGAGTCCTC 38540
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | |||| | || || || | ||||| ||||| ||||| | ||||
Sbjct 38539 AGACACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGACC 38481
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| | |||| ||| || || ||||| || |||| || ||||| ||||||||
Sbjct 38480 AACAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGACGGACGAACCCTGTCCGACTACA 38421
>seq1
Length=3245857
Score = 114 bits (126), Expect = 1e-20
Identities = 151/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323
|| |||||||||||||||||| |||| || ||| | | |||| | | | |||| | ||
Sbjct 3091377 CTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCGGACACCATCGACAACG-TCAA 3091435
Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383
|| |||| ||||| ||||| || ||| | ||||||||||| ||||| | || ||
Sbjct 3091436 GTCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAACAGCGTCTCATCTTTGCTGG 3091495
Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443
|||||||| || || | || || ||| ||||||||||||||| ||||| | || ||
Sbjct 3091496 TAAACAGCTCGAGGATGGACGTACTCTCTCCGACTACAACATCCAGAAGGAGTCTACCCT 3091555
Query 38444 GCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|| ||||| || | ||| | || ||
Sbjct 3091556 CCACCTGGTGTTGAGGTTGCGTGGTGG 3091582
>seq12
Length=702644
Score = 95.1 bits (104), Expect = 1e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAA 38324
||||||||||| ||||||||| |||| |||||| | | |||| | | | | |||
Sbjct 574933 CTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCGGACACGATCGACAATGTCAAA 574992
Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384
||||||| ||||||||||| || ||| | ||||| ||||| | |||| ||| ||
Sbjct 574993 TCCAAAATCCAGGACAAAGAGGGTATCCCCCCAGACCAGCAGCGATTGATTTTCGCCGGG 575052
Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
|||||||| || |||| | || |||| |||||||
Sbjct 575053 AAACAGCTCGAGGACGGCAGGACTCTCAGTGACTACA 575089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172437374720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |