Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq15 114 1e-20 seq1 114 1e-20 seq12 95.1 1e-14 >seq15 Length=579413 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || |||||||| | || || ||| | | Sbjct 38322 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAGGTTGAGTCTTCT 38263 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | ||| || || | ||||||||||| || ||| | |||||| Sbjct 38262 GACACCATCGACAATGTGAAATCGAAGATTCAGGACAAAGAGGGTATCCCCCCAGACCAA 38203 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| |||| || |||||| |||||||| Sbjct 38202 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTCTCGGACTACAAT 38143 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || || ||||||| || ||||| || ||| Sbjct 38142 ATCCAGAAAGAGTCGACGCTTCACTTGGTCCTCCGT 38107 Score = 100 bits (110), Expect = 3e-16 Identities = 166/238 (70%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || || |||||| |||| |||||||| | ||| ||||| |||||| ||| ||||| Sbjct 218571 CATGCGAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAAT 218512 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 ||||||||||| || || || || ||||| || |||| ||||| || || |||||| Sbjct 218511 CCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAG 218452 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCG 133074 | ||||| ||||| || || || | || || ||| | || || | | | | | Sbjct 218451 ATACCCTCAACGGCGGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCGCTCATCAGAG 218392 Query 133075 ATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTG--ACGCACGGCATCGTTTCGATGGC 133130 ||||| || ||||| | ||| |||||| | | ||| || || || |||||||| Sbjct 218391 ATCCACTTGAGAGCCCAGTTGGC--TTTCTTGGCAATGCAGGGGATGGTGTCGATGGC 218336 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| ||||| || || || || ||||| |||||||| | || |||||| || | Sbjct 38599 AATGCAAATCTTCGTTAAGACCCTTACCGGCAAGACCATCACTCTGGAGGTCGAGTCCTC 38540 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | || || || | ||||| ||||| ||||| | |||| Sbjct 38539 AGACACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGACC 38481 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| | |||| ||| || || ||||| || |||| || ||||| |||||||| Sbjct 38480 AACAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGACGGACGAACCCTGTCCGACTACA 38421 >seq1 Length=3245857 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 || |||||||||||||||||| |||| || ||| | | |||| | | | |||| | || Sbjct 3091377 CTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCGGACACCATCGACAACG-TCAA 3091435 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || |||| ||||| ||||| || ||| | ||||||||||| ||||| | || || Sbjct 3091436 GTCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAACAGCGTCTCATCTTTGCTGG 3091495 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 |||||||| || || | || || ||| ||||||||||||||| ||||| | || || Sbjct 3091496 TAAACAGCTCGAGGATGGACGTACTCTCTCCGACTACAACATCCAGAAGGAGTCTACCCT 3091555 Query 38444 GCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || ||||| || | ||| | || || Sbjct 3091556 CCACCTGGTGTTGAGGTTGCGTGGTGG 3091582 >seq12 Length=702644 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAA 38324 ||||||||||| ||||||||| |||| |||||| | | |||| | | | | ||| Sbjct 574933 CTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCGGACACGATCGACAATGTCAAA 574992 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 ||||||| ||||||||||| || ||| | ||||| ||||| | |||| ||| || Sbjct 574993 TCCAAAATCCAGGACAAAGAGGGTATCCCCCCAGACCAGCAGCGATTGATTTTCGCCGGG 575052 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||||||| || |||| | || |||| ||||||| Sbjct 575053 AAACAGCTCGAGGACGGCAGGACTCTCAGTGACTACA 575089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172437374720