Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq15 143 3e-29 seq5 129 7e-25 seq7 111 2e-19 seq6 84.2 3e-11 >seq15 Length=579413 Score = 143 bits (158), Expect = 3e-29 Identities = 173/234 (74%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| ||||||||| | || | || || ||| |||||||| | |||||| | ||| Sbjct 218327 CTCTTCGAAGCCATCGACACCATCCCCTGCATTGCCAAGAAAGCCAACTGGGCTCTCAAG 218386 Query 102150 TGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 102206 ||| | |||| ||| ||||||| || ||||| |||| ||||| ||| Sbjct 218387 TGGATCTCTGATGAGCGATCGA---CCTTTGCCGAACGACTAATCGCCTTTGCCGCCGTT 218443 Query 102207 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 102266 ||||||||||||||||| ||||||||| | || | ||||| |||||||| |||||| Sbjct 218444 GAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTGAAGAAGCGTGGTCTC 218503 Query 102267 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||| || | ||||||||||||||| ||||| || |||||||| || ||| Sbjct 218504 ATGCCCGGATTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCAC 218557 >seq5 Length=1078720 Score = 129 bits (142), Expect = 7e-25 Identities = 331/504 (66%), Gaps = 9/504 (2%) Strand=Plus/Plus Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785 || |||||||||||||| || | || ||||| |||||||| | || | | Sbjct 587224 CTTTTCAACGCTGGTACTCCTCACGCTCAGATGTCTTCATGTTTCCTCGTCGCCATGCGG 587283 Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845 || || || || | ||||| |||| |||||||| ||||| || ||||| ||| Sbjct 587284 GATGACTCTATTGAGGGCATCTACGACACTCTCAAGACCTGTGCTCAGATCTCCAAGACC 587343 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGT 111905 || |||||||| || | |||||||| | || | ||||| || ||| || Sbjct 587344 GCCGGTGGTATTGGTCTCCACATCCACAACATCCGTGCCAAGGGTTCATACATTGCCGGC 587403 Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965 || || || | || | ||||| | || ||||| || | ||| |||||||||| || Sbjct 587404 ACCAACGGCTACTCTAACGGTATCGTCCCCATGCTGCGAGCCTTTGACGCCACAGCTCGT 587463 Query 111966 TATGTAAACCAAGCTGGGCGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCA 112019 || || |||||| ||| | |||| || | | || |||| |||||||| Sbjct 587464 TACGTCGACCAAGGTGG---TAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCT 587520 Query 112020 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCG 112079 ||||| || ||| || | || ||||| || |||||| ||||| || | ||||| | Sbjct 587521 TGGCATGCCGATGTCTTCGACTTCCTGGACTTGCGTAAGAACCACGGAAAAGAGGAAGTC 587580 Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 || | || | |||| ||| || |||||||| ||||||||||||||| | || || Sbjct 587581 CGAGCAAGAGACTTGTTCTACGCCCTTTGGATTCCCGATCTCTTCATGAAGCGTGTCGAA 587640 Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199 ||| | ||| |||| | ||||| | | || || || ||| |||||| | Sbjct 587641 TCCGACGGCGACTGGACTCTGATGTGTCCGGCCGAGTGCCCAGGCCTCGCCGATGTCCAC 587700 Query 112200 GGTGAGGAGTTTGAAGCCCTCTAC 112223 || ||||||||| |||||| Sbjct 587701 TCCGAAGAGTTTGAAAAGCTCTAC 587724 >seq7 Length=1014673 Score = 111 bits (122), Expect = 2e-19 Identities = 246/360 (68%), Gaps = 7/360 (2%) Strand=Plus/Plus Query 13597 TCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGG 13656 ||||||| || ||| | || || ||| ||||| || || | || || | ||| Sbjct 187369 TCTATCAGGCTTCTACCTCTGAATTGTACGGTAAAGTGGTCGAAACCCCGCAGACAGAGA 187428 Query 13657 AGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCG 13716 ||| || |||||||| | ||| ||||| || |||| | ||| ||| ||| Sbjct 187429 CGACCCCATTCTACCCTAGGTCGCCATACGGCGTGGCAAAACTGTACGCATTCTGGATCG 187488 Query 13717 TAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAACCATG 13776 | |||||||| || || || ||| |||| ||||| ||| || || |||||||| | Sbjct 187489 TCGTCAATTACCGGGAATCATATGGAATGTTCACATGCAACGGGATTCTGTTCAACCACG 187548 Query 13777 AATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTAC-CGAG-GGTATCAAACA 13834 | ||||| | |||||| | ||||| || |||||| | |||| |||| | | | Sbjct 187549 AGTCACCTCGCCGAGGTCGAACATTTGTAACACGAAAGATTTCTCGAGCGGTAGCCGAAA 187608 Query 13835 AATCATGAAGGGTGAAAAGGAGTTCATTGAATT-GGGTAACATAAACGCGGAGAGAGATT 13893 | | || |||| | || || ||||| ||| ||| || || | || | ||||||| Sbjct 187609 TAGC-TGCAGGGAAACTAG-AGA-CATTGTATTTGGGGAATATCCATTCGAAAAGAGATT 187665 Query 13894 GGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCG 13953 |||| || || || |||||||| |||| |||||||| ||||| |||||||| |||||| Sbjct 187666 GGGGCCATGCTAAAGACTATGTGGAAGGAATGTGGCTGATGCTCCAACAAGA-CAAGCCG 187724 >seq6 Length=994530 Score = 84.2 bits (92), Expect = 3e-11 Identities = 161/236 (68%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 16054 GCTTTCCC-ACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCG 16112 ||||| || | ||| || ||||| || ||||||| ||| || || || || ||| Sbjct 407722 GCTTTACCGATGGCGTCGATCTCGTCGATGAAGATGATACACGGCGCATGTTTCTTTGCG 407781 Query 16113 ACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 16172 | |||||||||| || || | | || ||||| ||||||||||||||||| | Sbjct 407782 TTTGCAAAGAGATCTCGAACTCTGGAAGGACCGACACCGACAAACATCTCCACAAATTCG 407841 Query 16173 GCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 | |||| || |||||| || | || ||||| || |||| ||| || || Sbjct 407842 GAACCGGATACCGAGAGGAAGGGTACCTGAGCCTCACCAGCCGTGGCCTTGGCTAGCAGG 407901 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 || ||||| ||||| || ||| | ||||| || ||||| || || |||||||| Sbjct 407902 GTTTTACCGGTACCGGGAGGACCAGAGAGGATAGCTCCTCGAGGGATTTTGGCGCC 407957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741949961760