Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq7 120 4e-22 seq15 104 3e-17 seq6 93.3 5e-14 >seq7 Length=1014673 Score = 120 bits (132), Expect = 4e-22 Identities = 248/360 (69%), Gaps = 7/360 (2%) Strand=Plus/Plus Query 6904 TCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGG 6963 ||||||| || ||| |||| || ||| ||||| || || | || || | ||| Sbjct 187369 TCTATCAGGCTTCTACCTCTGAATTGTACGGTAAAGTGGTCGAAACCCCGCAGACAGAGA 187428 Query 6964 AGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCG 7023 ||| || |||||||| | ||| ||||| || |||| | ||| ||| ||| Sbjct 187429 CGACCCCATTCTACCCTAGGTCGCCATACGGCGTGGCAAAACTGTACGCATTCTGGATCG 187488 Query 7024 TCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATG 7083 || |||||||| || || || ||| |||| | ||| ||| || || |||||||| | Sbjct 187489 TCGTCAATTACCGGGAATCATATGGAATGTTCACATGCAACGGGATTCTGTTCAACCACG 187548 Query 7084 AATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTAC-CGAG-GGTATCAAACA 7141 | ||||| | |||||| | ||||| ||| |||||| | |||| |||| | | | Sbjct 187549 AGTCACCTCGCCGAGGTCGAACATTTGTAACACGAAAGATTTCTCGAGCGGTAGCCGAAA 187608 Query 7142 AATCATGAAGGGTGAAAAGGAGTTCATTGAATT-GGGTAACATAAACGCGGAGAGAGATT 7200 | | || |||| | || || ||||| ||| ||| || || | || | ||||||| Sbjct 187609 TAGC-TGCAGGGAAACTAG-AGA-CATTGTATTTGGGGAATATCCATTCGAAAAGAGATT 187665 Query 7201 GGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGAAGCCG 7260 |||| || || || |||||||| |||| |||||||| ||||| |||||||| |||||| Sbjct 187666 GGGGCCATGCTAAAGACTATGTGGAAGGAATGTGGCTGATGCTCCAACAAGA-CAAGCCG 187724 >seq15 Length=579413 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| |||||||| |||||||| || || || || |||||| | || ||||||||||| Sbjct 218557 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACC 218498 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||||| ||| | || | ||| || |||||||||||||||||||| || Sbjct 218497 ACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 218438 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AACCATTTCATTG 117463 ||||| || | || || ||||| |||| ||| | | | | ||| || | | Sbjct 218437 GGCAAAGGCGATTAGTCGTTCGGCAAAGG-TCGATCGCTCATCAGAGATCCACTTGAGAG 218379 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512 |||| || || ||||| |||| || || | || | ||||||||| || Sbjct 218378 CCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCGAA 218330 >seq6 Length=994530 Score = 93.3 bits (102), Expect = 5e-14 Identities = 163/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 9361 GCTTTCCC-ACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCG 9419 ||||| || | ||| || ||||| || ||||||| ||||| || || || ||| Sbjct 407722 GCTTTACCGATGGCGTCGATCTCGTCGATGAAGATGATACACGGCGCATGTTTCTTTGCG 407781 Query 9420 ATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9479 || |||||||||| ||||| || | || ||||| ||||||||||||||||| | Sbjct 407782 TTTGCAAAGAGATCTCGAACTCTGGAAGGACCGACACCGACAAACATCTCCACAAATTCG 407841 Query 9480 GCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 | |||| || |||||| || | || ||||| || |||| ||| || || Sbjct 407842 GAACCGGATACCGAGAGGAAGGGTACCTGAGCCTCACCAGCCGTGGCCTTGGCTAGCAGG 407901 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 || ||||| ||||| || ||| | ||||| || || || || || |||||||| Sbjct 407902 GTTTTACCGGTACCGGGAGGACCAGAGAGGATAGCTCCTCGAGGGATTTTGGCGCC 407957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980372263920