Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq7 120 4e-22
seq15 104 3e-17
seq6 93.3 5e-14
>seq7
Length=1014673
Score = 120 bits (132), Expect = 4e-22
Identities = 248/360 (69%), Gaps = 7/360 (2%)
Strand=Plus/Plus
Query 6904 TCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGG 6963
||||||| || ||| |||| || ||| ||||| || || | || || | |||
Sbjct 187369 TCTATCAGGCTTCTACCTCTGAATTGTACGGTAAAGTGGTCGAAACCCCGCAGACAGAGA 187428
Query 6964 AGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCG 7023
||| || |||||||| | ||| ||||| || |||| | ||| ||| |||
Sbjct 187429 CGACCCCATTCTACCCTAGGTCGCCATACGGCGTGGCAAAACTGTACGCATTCTGGATCG 187488
Query 7024 TCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATG 7083
|| |||||||| || || || ||| |||| | ||| ||| || || |||||||| |
Sbjct 187489 TCGTCAATTACCGGGAATCATATGGAATGTTCACATGCAACGGGATTCTGTTCAACCACG 187548
Query 7084 AATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTAC-CGAG-GGTATCAAACA 7141
| ||||| | |||||| | ||||| ||| |||||| | |||| |||| | | |
Sbjct 187549 AGTCACCTCGCCGAGGTCGAACATTTGTAACACGAAAGATTTCTCGAGCGGTAGCCGAAA 187608
Query 7142 AATCATGAAGGGTGAAAAGGAGTTCATTGAATT-GGGTAACATAAACGCGGAGAGAGATT 7200
| | || |||| | || || ||||| ||| ||| || || | || | |||||||
Sbjct 187609 TAGC-TGCAGGGAAACTAG-AGA-CATTGTATTTGGGGAATATCCATTCGAAAAGAGATT 187665
Query 7201 GGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGAAGCCG 7260
|||| || || || |||||||| |||| |||||||| ||||| |||||||| ||||||
Sbjct 187666 GGGGCCATGCTAAAGACTATGTGGAAGGAATGTGGCTGATGCTCCAACAAGA-CAAGCCG 187724
>seq15
Length=579413
Score = 104 bits (114), Expect = 3e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
||| |||||||| |||||||| || || || || |||||| | || |||||||||||
Sbjct 218557 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACC 218498
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
|||||||||| ||| | || | ||| || |||||||||||||||||||| ||
Sbjct 218497 ACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 218438
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AACCATTTCATTG 117463
||||| || | || || ||||| |||| ||| | | | | ||| || | |
Sbjct 218437 GGCAAAGGCGATTAGTCGTTCGGCAAAGG-TCGATCGCTCATCAGAGATCCACTTGAGAG 218379
Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512
|||| || || ||||| |||| || || | || | ||||||||| ||
Sbjct 218378 CCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCGAA 218330
>seq6
Length=994530
Score = 93.3 bits (102), Expect = 5e-14
Identities = 163/236 (69%), Gaps = 1/236 (0%)
Strand=Plus/Plus
Query 9361 GCTTTCCC-ACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCG 9419
||||| || | ||| || ||||| || ||||||| ||||| || || || |||
Sbjct 407722 GCTTTACCGATGGCGTCGATCTCGTCGATGAAGATGATACACGGCGCATGTTTCTTTGCG 407781
Query 9420 ATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9479
|| |||||||||| ||||| || | || ||||| ||||||||||||||||| |
Sbjct 407782 TTTGCAAAGAGATCTCGAACTCTGGAAGGACCGACACCGACAAACATCTCCACAAATTCG 407841
Query 9480 GCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539
| |||| || |||||| || | || ||||| || |||| ||| || ||
Sbjct 407842 GAACCGGATACCGAGAGGAAGGGTACCTGAGCCTCACCAGCCGTGGCCTTGGCTAGCAGG 407901
Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595
|| ||||| ||||| || ||| | ||||| || || || || || ||||||||
Sbjct 407902 GTTTTACCGGTACCGGGAGGACCAGAGAGGATAGCTCCTCGAGGGATTTTGGCGCC 407957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980372263920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |