Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq15 143 6e-29 seq1 132 1e-25 >seq15 Length=579413 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || |||||||| || |||||||| || | || |||| || ||||| ||||| Sbjct 38119 GTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCCAGCTG 38178 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || ||||||||||| || || || |||||||| ||||| || Sbjct 38179 CTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCCTGAATCTT 38238 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || || || |||||||| ||| || || ||||| || | |||||||| || Sbjct 38239 CGATTTCACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTTCCGGT 38298 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||| || ||||| | ||||| Sbjct 38299 AAGAGTCTTGACGAAGATCTGCAT 38322 Score = 134 bits (148), Expect = 3e-26 Identities = 124/157 (79%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022 |||| || | ||||| | || || || || ||||| || |||||||| |||||||| | Sbjct 38704 TGTAGTCAGACAGAGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATGAGTCGTTGCT 38763 Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082 | ||||| ||||| || ||||||||||| || || ||||||||| ||||||||||||| Sbjct 38764 GATCTGGGGGAATACCCTCTTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCCG 38823 Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119 || ||| ||||| ||||| | |||||||| ||||| Sbjct 38824 AAGATTCAACTTCGAGGGTGATGGTCTTTCCGGTCAA 38860 Score = 131 bits (144), Expect = 4e-25 Identities = 140/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||| || |||||||| || ||||| || | |||||| || ||||| || Sbjct 37601 ACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTCCTTCCATCCTCC 37660 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||| || || ||||| | | ||||||||||| |||||||| || ||||| || Sbjct 37661 AACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 37720 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||| ||||| || ||||| || || ||| || || || || | |||||| Sbjct 37721 ATTTTCGACTTCACGTTGTCGATGGTATCAGACGATTCAACCTCCAGTGTGATGGTCTTT 37780 Query 195112 CCTGT 195116 || || Sbjct 37781 CCCGT 37785 Score = 116 bits (128), Expect = 8e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022 |||| |||| || |||| || || || |||||||| || ||||| || | || |||| Sbjct 38421 TGTAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTT 38480 Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082 |||||||||||||||| || ||||| ||||| || ||||||||| || |||||||| | Sbjct 38481 GGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTG 38540 Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | || || || || || | ||||| || || | || || ||||| | ||||||| Sbjct 38541 AGGACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCATT 38599 >seq1 Length=3245857 Score = 132 bits (146), Expect = 1e-25 Identities = 135/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985 ||||| || ||||| || || ||||| || || || ||||| |||| ||||| | ||| Sbjct 3091570 CTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCA 3091511 Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 || |||||||| ||||| || ||||| || || ||||||||||| || || || || ||| Sbjct 3091510 TCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTG 3091451 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || || || || ||||||||| || |||||||||||| || || || ||||| Sbjct 3091450 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGT 3091395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480775516486