Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq15 123 2e-23
seq1 98.7 6e-16
>seq15
Length=579413
Score = 123 bits (136), Expect = 2e-23
Identities = 157/214 (73%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||||| || |||||||| || || |||||||| ||| |||| | || |||
Sbjct 38114 ACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCC 38173
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| |||||||| || || || || || |||||| | || | ||||| ||||| |
Sbjct 38174 AGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCCTGA 38233
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948
|||||| ||| || || | ||||| ||| | |||||| || | || |||||
Sbjct 38234 ATCTTCGATTTCAC--AT--TGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGT 38289
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| || |||||||| || ||||||||||||
Sbjct 38290 CTTTCCGGTAAGAGTCTTGACGAAGATCTGCATA 38323
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| || || |||||||| | | || |||| |||| ||| || ||||| ||
Sbjct 37904 TCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCCATCCTCCAACTGCTTGCCGGCGAAG 37963
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||||||| | || | ||||||||||| || || ||| ||
Sbjct 37964 ATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATTTTGGATTTCACATTG 38023
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
|||| | || | ||| || || | || ||||| ||||| || |||||||| ||
Sbjct 38024 TCTATGGTATCCGAAGACTCCACCTCAAGAGTAATGGTCTTTCCGGTAAGAGTCTTGACG 38083
Query 34971 AAGATCTGCATA 34982
||||||||||||
Sbjct 38084 AAGATCTGCATA 38095
>seq1
Length=3245857
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/210 (71%), Gaps = 8/210 (4%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || | ||||||||| |||| ||| | || || ||||| ||||| ||||| ||
Sbjct 3091582 CCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3091523
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | ||| |||| || |||||||| || ||||| || || || || |||||| | ||
Sbjct 3091522 AGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGG 3091463
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTC 34930
| ||||||||||| ||||| ||||| | | ||||| | ||| | |||
Sbjct 3091462 ATACCCTCCTTGTCCTGGATCTTGGACTTGAC----GTTGTCGATGGTGTCCGAAGACTC 3091407
Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAG 34960
||| |||| ||| |||||||| ||||| ||
Sbjct 3091406 AACCTCGAGGGTGATGGTTTTGCCCGTAAG 3091377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633370524624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |