Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq15 123 2e-23 seq1 98.7 6e-16 >seq15 Length=579413 Score = 123 bits (136), Expect = 2e-23 Identities = 157/214 (73%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || |||||||| || || |||||||| ||| |||| | || ||| Sbjct 38114 ACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCC 38173 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| |||||||| || || || || || |||||| | || | ||||| ||||| | Sbjct 38174 AGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCCTGA 38233 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||| || || | ||||| ||| | |||||| || | || ||||| Sbjct 38234 ATCTTCGATTTCAC--AT--TGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGT 38289 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || |||||||| || |||||||||||| Sbjct 38290 CTTTCCGGTAAGAGTCTTGACGAAGATCTGCATA 38323 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || |||||||| | | || |||| |||| ||| || ||||| || Sbjct 37904 TCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCCATCCTCCAACTGCTTGCCGGCGAAG 37963 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | ||||||||||| || || ||| || Sbjct 37964 ATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATTTTGGATTTCACATTG 38023 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 |||| | || | ||| || || | || ||||| ||||| || |||||||| || Sbjct 38024 TCTATGGTATCCGAAGACTCCACCTCAAGAGTAATGGTCTTTCCGGTAAGAGTCTTGACG 38083 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 38084 AAGATCTGCATA 38095 >seq1 Length=3245857 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/210 (71%), Gaps = 8/210 (4%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || | ||||||||| |||| ||| | || || ||||| ||||| ||||| || Sbjct 3091582 CCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3091523 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | ||| |||| || |||||||| || ||||| || || || || |||||| | || Sbjct 3091522 AGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGG 3091463 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTC 34930 | ||||||||||| ||||| ||||| | | ||||| | ||| | ||| Sbjct 3091462 ATACCCTCCTTGTCCTGGATCTTGGACTTGAC----GTTGTCGATGGTGTCCGAAGACTC 3091407 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAG 34960 ||| |||| ||| |||||||| ||||| || Sbjct 3091406 AACCTCGAGGGTGATGGTTTTGCCCGTAAG 3091377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633370524624