Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5 170 4e-37 seq15 104 4e-17 >seq5 Length=1078720 Score = 170 bits (188), Expect = 4e-37 Identities = 433/651 (67%), Gaps = 12/651 (2%) Strand=Plus/Minus Query 213471 ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTG 213530 || ||| |||| || || | | |||| ||||||||| || ||||| | || | | | | Sbjct 587975 ACGAACGCAGGGAGAGCCAGGGATGCCAAGTTGCAAACAGCGACCTCATCAGGGGCGGAG 587916 Query 213531 TACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTT 213590 ||||| ||||| ||||| |||| ||| || || ||| || || || | || ||||| Sbjct 587915 TACTCAATGATTTCGGTACACAAGTTACTCGATTTGATAGTACCGAGATGTTGCTGGTTG 587856 Query 213591 GACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGAC 213650 ||||| || ||||||| ||||||||| |||||| ||||| |||||||| || | | Sbjct 587855 GACTTGGCATTGGCAGCATCCTTGTAAAGCATGAAGGGGTTACCGGTCTCGGTTTGAGCC 587796 Query 213651 ACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCG 213708 | || || ||| ||| || | | ||| |||| | | ||| | | ||| Sbjct 587795 TCGAGGAT--GGCAAACCAAAGTTTCTGGGCTTTGATGGTCTTGC-GACCCTTACCGGCC 587739 Query 213709 TAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCG 213768 | ||||||| |||||||||| | || || | | ||| | | || || | Sbjct 587738 TT--CTCGTACGACTCGTAGAGCTTTTCAAACTCTTCGGAGTGGACATCGGCGAGGCCTG 587681 Query 213769 GACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACA 213828 | || || |||||||| || ||||||| ||||| | ||| | || |||||| | Sbjct 587680 GGCACTCGGCCGGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATGAAGA 587621 Query 213829 GGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGG-TCCTCCTCTCGTCCACTCCAGAG 213887 | || || | ||| || ||| ||||| ||| || | || || || || ||| | Sbjct 587620 GATCGGGAATCCAAAGGGCGTAGAACAAGTCTCTTGCTCGGACT-TCCTCTTTTCCGTGG 587562 Query 213888 TTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCA 213947 || || |||| || || ||||| |||| || || ||||| ||||| | |||||||||| Sbjct 587561 TTCTTACGCAAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCA 587502 Query 213948 AAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATG 214004 ||||| || || | |||| || || ||||| || | || || ||| Sbjct 587501 AAGGCACCGGGGCGCTTGTTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCT 587442 Query 214005 CGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAG 214064 ||||| | ||| || | ||||| || | |||||||| || || || || || || | Sbjct 587441 CGCAGCATGGGGACGATACCGTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTG 587382 Query 214065 GCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATC 214115 || | | |||| ||| ||| || || ||||||||| |||||||||| Sbjct 587381 GCACGGATGTTGTGGATGTGGAGACCAATACCACCGGCGGTCTTGGAGATC 587331 Score = 87.8 bits (96), Expect = 3e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 212688 AGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCT 212747 ||||| | ||||||||| || |||||| ||||| | | | ||| || || | ||| Sbjct 588853 AGATGGATGTTCAGGGATTGGGACTGGTCGATGAAAGCACCACGGTCGGCAGCAAGGTCG 588794 Query 212748 ATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGG 212807 |||| | ||||||||| |||||||||||||||| |||| | ||||| || | ||| Sbjct 588793 ATGACGGCCTTCTGGGAGATCTCCCACACGGTCTTGTAGATAGCCTTGAGCTCTGCCGGG 588734 Query 212808 AAGCCGGGGATGTTCTGCACAGACCC 212833 | | ||||||||| || | ||| || Sbjct 588733 ATGTTGGGGATGTTTTGAATAGATCC 588708 >seq15 Length=579413 Score = 104 bits (114), Expect = 4e-17 Identities = 170/245 (69%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || || ||||| |||||| || ||||| ||| ||||||| ||||||||||| | Sbjct 218571 CATGCGAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAAT 218512 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||||| || | || || |||||||| || | ||||| || || ||||||||| Sbjct 218511 CCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAG 218452 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || || || ||| | || | || | || | | || || ||| Sbjct 218451 ATACCCTCAACGGCGGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCGCTCATCAGAG 218392 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| || ||||||| || ||||| ||||| || || || || ||||| | Sbjct 218391 ATCCACTTGAGAGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCG 218332 Query 48371 AAGAG 48375 ||||| Sbjct 218331 AAGAG 218327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532124638720