Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5 190 4e-43 seq15 125 1e-23 >seq5 Length=1078720 Score = 190 bits (210), Expect = 4e-43 Identities = 473/710 (67%), Gaps = 11/710 (2%) Strand=Plus/Minus Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 |||| ||| || || || ||||| || | || |||| ||||| || ||||| | | Sbjct 587951 GCCAAGTTGCAAACAGCGACCTCATCAGGGGCGGAGTACTCAATGATTTCGGTACACAAG 587892 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 || || | ||||| || || || || | || || |||||| ||||||||| |||||| Sbjct 587891 TTACTCGATTTGATAGTACCGAGATGTTGCTGGTTGGACTTGGCATTGGCAGCATCCTTG 587832 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 || ||||| ||||| || ||||| |||||| | || || ||| |||| | Sbjct 587831 TAAAGCATGAAGGGGTTACCGGTCTCGGTTTGAGCCTCGAGGATGGCAAACCAAAGTT-T 587773 Query 221894 CTGGCGCTCACCGTCCTCTTGACTGCACCCT---CGGTCTTTTCATACCCGGTATAGAGC 221950 |||| ||| | ||||| ||||| ||| ||| || ||| |||||| Sbjct 587772 CTGG-GCTTTGA-TGGTCTTGCG---ACCCTTACCGGCCTTCTCGTACGACTCGTAGAGC 587718 Query 221951 ATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGA 222010 | ||||||| ||| || | ||| | |||||||| ||| ||| |||||||||||| Sbjct 587717 TTTTCAAACTCTTCGGAGTGGACATCGGCGAGGCCTGGGCACTCGGCCGGACACATCAGA 587658 Query 222011 CTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGA 222070 |||||| || | || ||| | || ||||||||| || || ||||| || || | Sbjct 587657 GTCCAGTCGCCGTCGGATTCGACACGCTTCATGAAGAGATCGGGAATCCAAAGGGCGTAG 587598 Query 222071 AAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCA 222130 || | ||||| | || ||||| |||| ||| || | || |||| || || Sbjct 587597 AACAAGTCTCTTGCTCGGACTTCCTCTTTTCCGTGGTTCTTACGCAAGTCCAGGAAGTCG 587538 Query 222131 AAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCA 222190 || | || || ||||| ||||| || |||| ||| | || ||||| |||||||| ||| Sbjct 587537 AAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTACCA 587478 Query 222191 CCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250 || || || || | | |||| ||| || || | || || | ||||| Sbjct 587477 CCTTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAGCATGGGGACGATACCGTTA 587418 Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACAT 222309 || ||||||||||| |||||| | ||| ||| | | ||| ||| | | Sbjct 587417 GAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACGGATGTT-GTGGATGTGGAG 587359 Query 222310 GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCC 222369 || |||||||||||| || |||||| || ||| ||||||||||||| |||||| Sbjct 587358 ACCAATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTTGAGAGTGTCGTAGATGCC 587299 Query 222370 CTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG 222419 ||| |||||||| ||| | | | || ||||| || |||||||||| Sbjct 587298 CTCAATAGAGTCATCCCGCATGGCGACGAGGAAACATGAAGACATCTGAG 587249 >seq15 Length=579413 Score = 125 bits (138), Expect = 1e-23 Identities = 227/328 (69%), Gaps = 7/328 (2%) Strand=Plus/Plus Query 25795 GCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAAC 25854 |||||||| ||| ||| |||| | ||| || ||||| | ||||||||| | Sbjct 218336 GCCATCGACACCATCCCCTGCATTGCCAAGAAAGCCAACTGGGCTCTCAAGTGGATCT-C 218394 Query 25855 AGCCAGAGCGCT--ACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCT 25912 | ||||| | || |||| ||| || || | |||||||| || || ||||| |||| Sbjct 218395 TGAT-GAGCGATCGACCTTTGCCGAACGACTAATCGCCTTTGCCGCCGTTGAGGGTATCT 218453 Query 25913 TTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGC 25972 | ||| |||||| || || ||||||||||||| ||| || || ||||||||| Sbjct 218454 TCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCCGGAT 218513 Query 25973 TGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCC 26032 || ||| ||||||||||||||| | | ||||||||||| |||| || || || || | Sbjct 218514 TGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTCGCATGTC 218573 Query 26033 TGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCA 26092 | || | ||| |||| || |||| | ||| || | | ||||||| Sbjct 218574 TCCTATTCAC---CCACCTGAGGAGACGACCTGACCCCCGGACTGTTGAGAAGATCATCA 218630 Query 26093 AAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 |||||||||| |||| ||| ||||||| Sbjct 218631 AAGAGGCTGTCAAGATTGAGCAGGAGTT 218658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844126587520