Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq7 107 2e-18
seq15 104 3e-17
seq5 102 1e-16
seq6 84.2 3e-11
>seq7
Length=1014673
Score = 107 bits (118), Expect = 2e-18
Identities = 242/353 (69%), Gaps = 12/353 (3%)
Strand=Plus/Minus
Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678
|||||||| ||||| |||||||| |||| |||||||| || ||||| ||||| |||||
Sbjct 187717 TCTTGTTGGAGCATCAGCCACATTCCTTCCACATAGTCTTTAGCATGGCCCCAATCTCTT 187658
Query 177679 GCAGCGTTGAGGTTACCGAGTT-CAAGGAACTCTCTC-TCACCTTTCA-CAATTT-GTTT 177734
| | || || || | | ||| | ||||| | || | || | |||| | |
Sbjct 187657 TTCGAATGGATATTCCCCAAATACAATG---TCTCTAGTTTCCCTGCAGCTATTTCGGCT 187601
Query 177735 GACGCCATC-AGTAATCTTCTTTGTGACAAA-GTCGGCACCTCGTCTCGGTGATTCGTGG 177792
||| || || |||||| ||| ||||| || | |||||| | ||||| ||||||
Sbjct 187600 ACCGC--TCGAGAAATCTTTCGTGTTACAAATGTTCG-ACCTCGGCGAGGTGACTCGTGG 187544
Query 177793 TTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGC 177852
||||| || || ||| ||| | |||| ||||| ||||| |||||||| ||||| |
Sbjct 187543 TTGAACAGAATCCCGTTGCATGTGAACATTCCATATGATTCCCGGTAATTGACGACGATC 187484
Query 177853 CAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCA 177912
||| ||| || ||| | ||||| || || | |||||||| || ||| |||
Sbjct 187483 CAGAATGCGTACAGTTTTGCCACGCCGTATGGCGACCTAGGGTAGAATGGGGTCGTCTCT 187424
Query 177913 GTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
|| || || ||||| |||||||| ||| || || || || || || ||
Sbjct 187423 GTCTGCGGGGTTTCGACCACTTTACCGTACAATTCAGAGGTAGAAGCCTGATA 187371
>seq15
Length=579413
Score = 104 bits (114), Expect = 3e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049
|| ||||||||| | || | || || |||| ||||| || || ||||| | || |||
Sbjct 218330 TTCGAAGCCATCGACACCATCCCCTGCATTGCCAAGAAAGCCAACTGGGCTCTCAAGTGG 218389
Query 65050 TT-TGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGG 65108
| | | | ||| |||| ||||| || || | || ||||| || |||||
Sbjct 218390 ATCTCTGATGAGCGATCGA-CCTTTGCCGAACGACTAATCGCCTTTGCCGCCGTTGAGGG 218448
Query 65109 TATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCC 65168
||||||||||||||| || ||| | || | ||| |||||||||| |||||||||||
Sbjct 218449 TATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTGAAGAAGCGTGGTCTCATGCC 218508
Query 65169 AGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217
|| | |||||| || || || || |||||||| |||||||| |||
Sbjct 218509 CGGATTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCAC 218557
>seq5
Length=1078720
Score = 102 bits (112), Expect = 1e-16
Identities = 469/738 (64%), Gaps = 17/738 (2%)
Strand=Plus/Plus
Query 75326 CTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAG 75385
|| ||||| |||||||| || | |||||||| || ||||| |||||| |
Sbjct 587224 CTTTTCAACGCTGGTACTCCTCACGCTCAGATGTCTTCATGTTTCCTCGTCGCCATGCGG 587283
Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445
|| ||||| || | || ||||| | ||||| | | ||||| || ||||| |||
Sbjct 587284 GATGACTCTATTGAGGGCATCTACGACACTCTCAAGACCTGTGCTCAGATCTCCAAGACC 587343
Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505
|| || |||||||| | |||||||| | | | ||||| || ||| ||
Sbjct 587344 GCCGGTGGTATTGGTCTCCACATCCACAACATCCGTGCCAAGGGTTCATACATTGCCGGC 587403
Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565
|| || || | || | ||||| | || ||||| || | ||| |||||||||| ||
Sbjct 587404 ACCAACGGCTACTCTAACGGTATCGTCCCCATGCTGCGAGCCTTTGACGCCACAGCTCGT 587463
Query 75566 TATGTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCA 75619
|| || | |||| || | |||| | || || | || ||||| | || ||
Sbjct 587464 TACGTCGACCAAGGTGG---TAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCT 587520
Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679
|||||||||||| || | || ||||| || || || ||||| || | || || |
Sbjct 587521 TGGCATGCCGATGTCTTCGACTTCCTGGACTTGCGTAAGAACCACGGAAAAGAGGAAGTC 587580
Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739
|| ||||| | || | |||| |||||||| || || ||||||||||| || ||
Sbjct 587581 CGAGCAAGAGACTTGTTCTACGCCCTTTGGATTCCCGATCTCTTCATGAAGCGTGTCGAA 587640
Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799
| || | ||| |||| | ||||| | | || ||||| ||| |||| |
Sbjct 587641 TCCGACGGCGACTGGACTCTGATGTGTCCGGCCGAGTGCCCAGGCCTCGCCGATGTCCAC 587700
Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA---GAGCCAATGCG 75856
|| ||||||||| |||||| ||| || ||| |||| | ||| |
Sbjct 587701 TCCGAAGAGTTTGAAAAGCTCTACGAGTCGTACGAGAAGGCCGGTAAGGGTCGCAA---G 587757
Query 75857 ACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916
|| | |||| | ||||| || || ||| | | || || ||||| || |
Sbjct 587758 ACCATCAAAGCCCAGAAACTTTGGTTTGCCATCCTCGAGGCTCAAACCGAGACCGGTAAC 587817
Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976
|| | |||||||||||||||||| || ||| ||||| | || | || ||
Sbjct 587818 CCCTTCATGCTTTACAAGGATGCTGCCAATGCCAAGTCCAACCAGCAACATCTCGGTACT 587877
Query 75977 ATCAAGAGCTCAAATCTT-TGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035
||||| | | | ||| || || ||||| | |||||| | | |||||| ||
Sbjct 587878 ATCAA-ATCGAGTAACTTGTGTACCGAAATCATTGAGTACTCCGCCCCTGATGAGGTCGC 587936
Query 76036 TGTTTGCAATTTGGCATC 76053
||||||||| ||||||||
Sbjct 587937 TGTTTGCAACTTGGCATC 587954
>seq6
Length=994530
Score = 84.2 bits (92), Expect = 3e-11
Identities = 153/224 (68%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335
|| ||||| ||||| ||||| || | ||| | ||| || ||||| || || |||||
Sbjct 407957 GGCGCCAAAATCCCTCGAGGAGCTATCCTCTCTGGTCCTCCCGGTACCGGTAAAACCCTG 407898
Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395
|| ||| |||| || ||||| | | || || ||| || | || | | |
Sbjct 407897 CTAGCCAAGGCCACGGCTGGTGAGGCTCAGGTACCCTTCCTCTCGGTATCCGGTTCCGAA 407838
Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455
||||||||||||||||| ||||| ||| | || ||||| |||||||||| || |||
Sbjct 407837 TTTGTGGAGATGTTTGTCGGTGTCGGTCCTTCCAGAGTTCGAGATCTCTTTGCAAACGCA 407778
Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499
|| || || ||||| ||||||| || ||||| || ||
Sbjct 407777 AAGAAACATGCGCCGTGTATCATCTTCATCGACGAGATCGACGC 407734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569167487040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |