Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq7 107 2e-18 seq15 104 3e-17 seq5 102 1e-16 seq6 84.2 3e-11 >seq7 Length=1014673 Score = 107 bits (118), Expect = 2e-18 Identities = 242/353 (69%), Gaps = 12/353 (3%) Strand=Plus/Minus Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678 |||||||| ||||| |||||||| |||| |||||||| || ||||| ||||| ||||| Sbjct 187717 TCTTGTTGGAGCATCAGCCACATTCCTTCCACATAGTCTTTAGCATGGCCCCAATCTCTT 187658 Query 177679 GCAGCGTTGAGGTTACCGAGTT-CAAGGAACTCTCTC-TCACCTTTCA-CAATTT-GTTT 177734 | | || || || | | ||| | ||||| | || | || | |||| | | Sbjct 187657 TTCGAATGGATATTCCCCAAATACAATG---TCTCTAGTTTCCCTGCAGCTATTTCGGCT 187601 Query 177735 GACGCCATC-AGTAATCTTCTTTGTGACAAA-GTCGGCACCTCGTCTCGGTGATTCGTGG 177792 ||| || || |||||| ||| ||||| || | |||||| | ||||| |||||| Sbjct 187600 ACCGC--TCGAGAAATCTTTCGTGTTACAAATGTTCG-ACCTCGGCGAGGTGACTCGTGG 187544 Query 177793 TTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGC 177852 ||||| || || ||| ||| | |||| ||||| ||||| |||||||| ||||| | Sbjct 187543 TTGAACAGAATCCCGTTGCATGTGAACATTCCATATGATTCCCGGTAATTGACGACGATC 187484 Query 177853 CAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCA 177912 ||| ||| || ||| | ||||| || || | |||||||| || ||| ||| Sbjct 187483 CAGAATGCGTACAGTTTTGCCACGCCGTATGGCGACCTAGGGTAGAATGGGGTCGTCTCT 187424 Query 177913 GTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || || || ||||| |||||||| ||| || || || || || || || Sbjct 187423 GTCTGCGGGGTTTCGACCACTTTACCGTACAATTCAGAGGTAGAAGCCTGATA 187371 >seq15 Length=579413 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049 || ||||||||| | || | || || |||| ||||| || || ||||| | || ||| Sbjct 218330 TTCGAAGCCATCGACACCATCCCCTGCATTGCCAAGAAAGCCAACTGGGCTCTCAAGTGG 218389 Query 65050 TT-TGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGG 65108 | | | | ||| |||| ||||| || || | || ||||| || ||||| Sbjct 218390 ATCTCTGATGAGCGATCGA-CCTTTGCCGAACGACTAATCGCCTTTGCCGCCGTTGAGGG 218448 Query 65109 TATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCC 65168 ||||||||||||||| || ||| | || | ||| |||||||||| ||||||||||| Sbjct 218449 TATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTGAAGAAGCGTGGTCTCATGCC 218508 Query 65169 AGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || | |||||| || || || || |||||||| |||||||| ||| Sbjct 218509 CGGATTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCAC 218557 >seq5 Length=1078720 Score = 102 bits (112), Expect = 1e-16 Identities = 469/738 (64%), Gaps = 17/738 (2%) Strand=Plus/Plus Query 75326 CTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAG 75385 || ||||| |||||||| || | |||||||| || ||||| |||||| | Sbjct 587224 CTTTTCAACGCTGGTACTCCTCACGCTCAGATGTCTTCATGTTTCCTCGTCGCCATGCGG 587283 Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445 || ||||| || | || ||||| | ||||| | | ||||| || ||||| ||| Sbjct 587284 GATGACTCTATTGAGGGCATCTACGACACTCTCAAGACCTGTGCTCAGATCTCCAAGACC 587343 Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 || || |||||||| | |||||||| | | | ||||| || ||| || Sbjct 587344 GCCGGTGGTATTGGTCTCCACATCCACAACATCCGTGCCAAGGGTTCATACATTGCCGGC 587403 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || || | || | ||||| | || ||||| || | ||| |||||||||| || Sbjct 587404 ACCAACGGCTACTCTAACGGTATCGTCCCCATGCTGCGAGCCTTTGACGCCACAGCTCGT 587463 Query 75566 TATGTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCA 75619 || || | |||| || | |||| | || || | || ||||| | || || Sbjct 587464 TACGTCGACCAAGGTGG---TAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCT 587520 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 |||||||||||| || | || ||||| || || || ||||| || | || || | Sbjct 587521 TGGCATGCCGATGTCTTCGACTTCCTGGACTTGCGTAAGAACCACGGAAAAGAGGAAGTC 587580 Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || ||||| | || | |||| |||||||| || || ||||||||||| || || Sbjct 587581 CGAGCAAGAGACTTGTTCTACGCCCTTTGGATTCCCGATCTCTTCATGAAGCGTGTCGAA 587640 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 | || | ||| |||| | ||||| | | || ||||| ||| |||| | Sbjct 587641 TCCGACGGCGACTGGACTCTGATGTGTCCGGCCGAGTGCCCAGGCCTCGCCGATGTCCAC 587700 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA---GAGCCAATGCG 75856 || ||||||||| |||||| ||| || ||| |||| | ||| | Sbjct 587701 TCCGAAGAGTTTGAAAAGCTCTACGAGTCGTACGAGAAGGCCGGTAAGGGTCGCAA---G 587757 Query 75857 ACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 || | |||| | ||||| || || ||| | | || || ||||| || | Sbjct 587758 ACCATCAAAGCCCAGAAACTTTGGTTTGCCATCCTCGAGGCTCAAACCGAGACCGGTAAC 587817 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || | |||||||||||||||||| || ||| ||||| | || | || || Sbjct 587818 CCCTTCATGCTTTACAAGGATGCTGCCAATGCCAAGTCCAACCAGCAACATCTCGGTACT 587877 Query 75977 ATCAAGAGCTCAAATCTT-TGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||||| | | | ||| || || ||||| | |||||| | | |||||| || Sbjct 587878 ATCAA-ATCGAGTAACTTGTGTACCGAAATCATTGAGTACTCCGCCCCTGATGAGGTCGC 587936 Query 76036 TGTTTGCAATTTGGCATC 76053 ||||||||| |||||||| Sbjct 587937 TGTTTGCAACTTGGCATC 587954 >seq6 Length=994530 Score = 84.2 bits (92), Expect = 3e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || ||||| ||||| ||||| || | ||| | ||| || ||||| || || ||||| Sbjct 407957 GGCGCCAAAATCCCTCGAGGAGCTATCCTCTCTGGTCCTCCCGGTACCGGTAAAACCCTG 407898 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395 || ||| |||| || ||||| | | || || ||| || | || | | | Sbjct 407897 CTAGCCAAGGCCACGGCTGGTGAGGCTCAGGTACCCTTCCTCTCGGTATCCGGTTCCGAA 407838 Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 ||||||||||||||||| ||||| ||| | || ||||| |||||||||| || ||| Sbjct 407837 TTTGTGGAGATGTTTGTCGGTGTCGGTCCTTCCAGAGTTCGAGATCTCTTTGCAAACGCA 407778 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 || || || ||||| ||||||| || ||||| || || Sbjct 407777 AAGAAACATGCGCCGTGTATCATCTTCATCGACGAGATCGACGC 407734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569167487040