Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 2e-12 seq1 87.8 5e-12 >seq5 Length=1078720 Score = 89.7 bits (98), Expect = 2e-12 Identities = 169/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 |||||||| ||| | || ||||| || ||||||||||| || || || || || Sbjct 662551 TCTTCCATCGCCTTCACCAACCGACGTTGGATATAACCAGTCTCAGCAGTCTTCACCGCA 662610 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 |||||||| | ||| | |||||||||||||| |||||||| | ||||| || | Sbjct 662611 GTATCAATCAAACCCTCTCGACCACCCATAGCGTGGAAGAAGAACTCTTGAGGAGTCAAA 662670 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | | ||||| | || ||||| || | || || || || ||| || | Sbjct 662671 CCACGGAGGTAGGAGTTTTCTACGAATCCTCTCGATTCCGGTCCATAGTCATCTTTCGAG 662730 Query 302752 AAGTGTGGCAGGGTCCTGT-TCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 || || || || ||||||| ||| | | ||| | || ||||| || || |||||| |||| Sbjct 662731 AAATGGGGAAGAGTCCTGTGTCTGA-ATCCGAACGGTATACGTTTCCCTTCAACGATCTG 662789 Query 302811 CTGTCC 302816 || || Sbjct 662790 TTGACC 662795 >seq1 Length=3245857 Score = 87.8 bits (96), Expect = 5e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||| |||| ||||| ||| ||||||||| ||||||||||||||||| || ||| | | Sbjct 2949064 TGGCCGATTGTCATTCGAGAGGGAATAGCGTGGGGATTGATGATGATATCCGGTGTTATA 2949005 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957 || || || || ||||||||||||| || | ||| | | ||||| || ||||| || Sbjct 2949004 CCCTCCGCGGTAAAGGGCATATCCTCTT-GGCGATAGGTAATACCAATTGTACCCTTCTG 2948946 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 || || | || ||||||||| || || Sbjct 2948945 ACCATGTCTCGACGCGAACTTATCGCCGAT 2948916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816506255546