Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq15 152 6e-31
seq5 131 2e-24
seq4 98.7 1e-14
>seq15
Length=579413
Score = 152 bits (168), Expect = 6e-31
Identities = 211/289 (73%), Gaps = 11/289 (4%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| || ||| | |||||| |||| | ||||||||||| || |||||
Sbjct 218551 ACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACCACGCTT 218492
Query 869239 CTTGAGCCAAAAGATGG---CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 869295
||| ||||| ||||||| || || ||| | ||||| ||||| ||||| ||||||||
Sbjct 218491 CTTCAGCCAGAAGATGGAAGCGAAGGAACCG---GAGAAGAAGATACCCTCAACGGCGGC 218435
Query 869296 AAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355
|||| |||| || || ||||||||| ||||| | ||| | ||||||||| | ||
Sbjct 218434 AAAGGCGATTAGTCGTTCGGCAAAG--GTCGA-TCGCTCATCAGAGATCCACTTGAGAGC 218378
Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCT 869414
||||| ||| || || | | || | ||||||||||| ||||||| ||||
Sbjct 218377 CCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCGAAGAGGTAAGTCC- 218319
Query 869415 TTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
||| |||||||||| ||||||||||||||||| || ||||||||
Sbjct 218318 GGCGGGCGGGGTCCTTGATGTAGGTGTCGATCAGGAGGGAGTAGGTCTC 218270
>seq5
Length=1078720
Score = 131 bits (144), Expect = 2e-24
Identities = 180/252 (71%), Gaps = 0/252 (0%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||| || || ||| ||| |||| | || |||||||| |||| ||||| ||
Sbjct 587474 TGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAGCATGGGGACGATACCGTTAGAG 587415
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| |||||||||||| || | ||| | || ||| || | ||||| | | ||
Sbjct 587414 TAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACGGATGTTGTGGATGTGGAGACCA 587355
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || ||||| | ||||||||| | || || ||||| |||||||||||||||||
Sbjct 587354 ATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTTGAGAGTGTCGTAGATGCCCTCA 587295
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
|| ||||| || |||| | ||||| || || || || | || | ||| | || ||
Sbjct 587294 ATAGAGTCATCCCGCATGGCGACGAGGAAACATGAAGACATCTGAGCGTGAGGAGTACCA 587235
Query 1630306 GCGTTGAAGAGC 1630317
|||||||| |||
Sbjct 587234 GCGTTGAAAAGC 587223
>seq4
Length=1370089
Score = 98.7 bits (108), Expect = 1e-14
Identities = 164/237 (69%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 18234 CGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCC 18293
|||| ||||| ||| | | ||||| || || || ||||| |||| ||||| | ||
Sbjct 561609 CGAGTTCGATCAAGTCCACCTGCAGTCTGGGACAGAACACGGCATCACCCTCGGTACCCC 561550
Query 18294 CGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAA 18353
| | || || | || |||| ||||| |||||| |||||| |||| | |
Sbjct 561549 CATAGGTCTTATCGTTCACAACAAAGACCAACGGCCCCACGACTACGCCGAGACCGACCT 561490
Query 18354 GGTGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTC 18413
| || || || || || ||||| | ||||||| | |||||||||||| |||| || ||
Sbjct 561489 CTTCCCCCGCCCATCCCATGCCGATTTCACCTACCTCGCCAAGTACGGCGTCAAAGCCTC 561430
Query 18414 GTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGC 18470
||| || || || ||| | ||||| || |||||| || || || ||||| || ||
Sbjct 561429 GTCAGGAGGTGGTCGGGCCTCTGCACGAGAGACCATCGGTCGAGTTGCCGCTGGAGC 561373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107134440248386
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |