Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq15 102 7e-17 >seq15 Length=579413 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || | | Sbjct 38322 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAGGTTGAGTCTTCT 38263 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||| || |||||||| || || || || || ||| Sbjct 38262 GACACCATCGACAATGTGAAATCGAAGATTCAGGACAAAGAGGGTATCCCCCCAGACCAA 38203 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || |||||||| || ||| | | || || || || Sbjct 38202 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTCTCGGACTACAAT 38143 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || || || ||||| || |||||||| Sbjct 38142 ATCCAGAAAGAGTCGACGCTTCACTTGGT 38114 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || ||||| || || || || | | Sbjct 38094 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATTACTCTTGAGGTGGAGTCTTCG 38035 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || |||| | || ||| || ||||| ||||| || || || || || || || Sbjct 38034 GATACCATAGACAATGTGAAATCCAAAATCCAGGACAAGGAGGGTATCCCCCCAGACCAG 37975 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || ||| |||||||| | | | |||| || || || Sbjct 37974 CAGCGTCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGGCGCACTTTGTCGGACTACAAT 37915 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || ||||| || ||||| || |||| Sbjct 37914 ATCCAGAAGGAGTCTACACTTCATCTTG 37887 Score = 91.5 bits (100), Expect = 1e-13 Identities = 132/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 24725 CTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAA 24783 ||||| || || || || || || || || ||| | | || || | || |||| || Sbjct 37788 CTAACGGGAAAGACCATCACACTGGAGGTTGAATCGTCTGATACCATCGACAACGTGAAG 37729 Query 24784 ACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGG 24843 | ||| ||||| ||||| || || || || || || ||||| | |||||||||||||| Sbjct 37728 TCGAAA-ATCCAGGACAAGGAGGGCATTCCCCCAGACCAACAGAGGTTGATCTTTGCCGG 37670 Query 24844 GAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACT 24903 ||| ||| |||||||| || | | || || || ||||| ||||| ||||| || || Sbjct 37669 GAAGCAGTTGGAGGATGGAAGGACTCTTTCGGACTACAACATCCAAAAAGAATCTACTCT 37610 Query 24904 ACAC 24907 |||| Sbjct 37609 ACAC 37606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897273824240