Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq15 159 5e-33 seq5 104 4e-16 >seq15 Length=579413 Score = 159 bits (176), Expect = 5e-33 Identities = 196/262 (75%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 794380 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAG 794439 ||||||||||| || |||||||| ||||| ||||||| | ||| || ||||| ||| Sbjct 218511 CCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAG 218452 Query 794440 ATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTG 794499 || ||||| |||||||||||| ||| || || |||||||| || | | ||| | Sbjct 218451 ATACCCTCAACGGCGGCAAAGGCGATTAGTCGTTCGGCAAAGGT---CGATCGCTCATCA 218395 Query 794500 TTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCG-AGGGCACCGTGTCGATGGC 794558 ||||||||| | ||||| | || |||| | || | |||| | ||||||||||| Sbjct 218394 GAGATCCACTTGAGAGCCCAGT-TGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGC 218336 Query 794559 GCGAAAGAGGT-GGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGT 794617 ||||||| |||| | | | |||||||||| |||||||||||| ||||| |||| Sbjct 218335 TTCGAAGAGGTAAGTCCGGC-GGGCGGGGTCCTTGATGTAGGTGTCGATCAGGAGGGAGT 218277 Query 794618 AGGTCTCTGAGTGGATGTTTTC 794639 ||||||| ||||||||||| || Sbjct 218276 AGGTCTCAGAGTGGATGTTCTC 218255 >seq5 Length=1078720 Score = 104 bits (114), Expect = 4e-16 Identities = 174/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 |||||||| || || || ||| ||| |||| | || |||||||| || | ||||| || Sbjct 587474 TGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAGCATGGGGACGATACCGTTAGAG 587415 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | |||||||||||| || | ||| | ||| ||| || | ||||| | | || Sbjct 587414 TAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACGGATGTTGTGGATGTGGAGACCA 587355 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || ||||| | ||||||||| | || || | || || || |||||||||||||| Sbjct 587354 ATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTTGAGAGTGTCGTAGATGCCCTCA 587295 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||||| || |||| | | || || || || || | || | | | | || || Sbjct 587294 ATAGAGTCATCCCGCATGGCGACGAGGAAACATGAAGACATCTGAGCGTGAGGAGTACCA 587235 Query 2073781 GCATTGAAGAGC 2073792 || ||||| ||| Sbjct 587234 GCGTTGAAAAGC 587223 Score = 89.7 bits (98), Expect = 8e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGC 2071860 ||||| || ||||| ||| || | || | |||||||||| | | | || || | Sbjct 587687 AGGCCTGGGCACTCGGCCGGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTC 587628 Query 2071861 ATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTG 2071920 || || || ||| |||| ||| |||| || | || | || ||| ||||| || Sbjct 587627 ATGAAGAGATCGGGAATCCAAAGGGCGTAGAACAAGTCTCTTGCTCGGACTTCCTCTTTT 587568 Query 2071921 CCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980 ||||||||||| || ||| || |||||| || ||||| ||||| ||||| |||||| Sbjct 587567 CCGTGGTTCTTACGCAAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAG 587508 Query 2071981 CAGGCAAAGGCGCCCTTGCGCTTG 2072004 ||||||||| || ||||||| Sbjct 587507 ATGGCAAAGGCACCGGGGCGCTTG 587484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916240230275462