Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq15 132 3e-26 seq1 86.0 4e-12 >seq15 Length=579413 Score = 132 bits (146), Expect = 3e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| || |||| || ||||||||| || || |||||||| | ||||| |||| Sbjct 37882 CAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCCATC 37941 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| ||||| |||||||||||||| || ||||||||| | || | ||||||||||| Sbjct 37942 CTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTC 38001 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | ||||| ||| || |||| | || | ||| || |||| || ||||| Sbjct 38002 CTGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACCTCAAGAGTAATGGT 38061 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || || ||||| || ||||||||||| Sbjct 38062 CTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094 Score = 122 bits (134), Expect = 6e-23 Identities = 158/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| || ||| ||||| || || |||||||| ||| | || | || Sbjct 38111 AGGACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCT 38170 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||||||||||||||| || || |||||| | || | ||||| ||||| Sbjct 38171 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCC 38230 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||| || || | ||||| ||| | ||| || |||| || || Sbjct 38231 TGAATCTTCGATTTCAC--AT--TGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGAT 38286 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||||| || || ||||| || ||||||||||| Sbjct 38287 GGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38322 Score = 84.2 bits (92), Expect = 1e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 34802 TAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGG 34861 ||||| || ||| | || | || || || |||||||| ||||| |||| || || ||| Sbjct 38423 TAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGG 38482 Query 34862 TCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTG 34921 ||| | || | ||||||||||| | || || |||||| | || | || | Sbjct 38483 TCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAG 38542 Query 34922 GCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||||| || | || |||||||| || || |||||||| || ||||| ||||| Sbjct 38543 GACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCAT 38598 >seq1 Length=3245857 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | |||||||| |||||||| | ||| ||||||||| ||||| ||||| || Sbjct 3091582 CCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3091523 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || || || || || || ||||| || || || |||||| | || Sbjct 3091522 AGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGG 3091463 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || |||||| | || | || | ||| || Sbjct 3091462 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACC 3091403 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGG 34957 || | ||| ||||| || ||||| ||| Sbjct 3091402 TCGAGGGTGATGGTTTTGCCCGTAAGG 3091376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692569775902