Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3 107 1e-17 >seq3 Length=1407364 Score = 107 bits (118), Expect = 1e-17 Identities = 200/292 (68%), Gaps = 4/292 (1%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||| || ||||| || ||||| ||||| | || | || | || || | || Sbjct 267860 ACGAGACGGTTGTCAAAGTCCTCACCACCCAAGTGGGTGTCACCAGCGGTGGCCTTGACC 267919 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || ||||||| || | || | ||||| ||| |||||||| | ||| Sbjct 267920 TCGAAGATACCCTCTTCAATAGTAAGGAGCGAGACATCGAAGGTACCACCACCGAGATCG 267979 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAG 282359 || || | || ||| |||| || || || || |||||||| || || | ||| | Sbjct 267980 AAGATCAAAACGTTC--TTCTCGCCCTCGGACTTCTTGTCAAGACCGTAAGCGATAGCGG 268037 Query 282360 CAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTT 282419 |||| || || || || || |||| | || | ||||||||||| | || || |||| Sbjct 268038 CAGCGGTGGGCTCGTTGATGATTCGGAGGACGTCGAGACCAGCAATCATACCAGCGTCTT 268097 Query 282420 TAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 | ||||| || | || || ||||| || || || |||||||| | |||||| Sbjct 268098 TTGTGGCCTGACGCTGGGAGTCGTTGAAGTAGGCGGGAACAGTGACAACGGC 268149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740627552445108