Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq15 95.1 2e-14 seq1 84.2 4e-11 >seq15 Length=579413 Score = 95.1 bits (104), Expect = 2e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| |||||||||||||| || || || || || || ||| | || || Sbjct 37594 ACGGAGGACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTCCTTCC 37653 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || | || || || |||||||| | || ||||| ||||| || || || ||||| Sbjct 37654 ATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATGCCCTCCTT 37713 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || || || | || || || || || |||||| | ||| || |||| || || Sbjct 37714 GTCCTGGATTTTCGACTTCACGTTGTCGATGGTATCAGACGATTCAACCTCCAGTGTGAT 37773 Query 82775 CGTCTTGCCTGT 82786 ||||| || || Sbjct 37774 GGTCTTTCCCGT 37785 >seq1 Length=3245857 Score = 84.2 bits (92), Expect = 4e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | ||| | || || | ||| || ||||| || ||||| || || || || || Sbjct 3091583 ACCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 3091524 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 ||| | | || || || || ||||| ||||||||||| || | ||||| ||||| || Sbjct 3091523 GAGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGG 3091464 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || ||||| || || ||||| | || || || || || || || || || || Sbjct 3091463 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAAC 3091404 Query 82763 TTCCAAAGTTATCGTCTTGCCTGT 82786 || | || || || ||||| || Sbjct 3091403 CTCGAGGGTGATGGTTTTGCCCGT 3091380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826470379662