Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq15 95.1 2e-14
seq1 84.2 4e-11
>seq15
Length=579413
Score = 95.1 bits (104), Expect = 2e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| |||||||||||||| || || || || || || ||| | || ||
Sbjct 37594 ACGGAGGACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTCCTTCC 37653
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || | || || || |||||||| | || ||||| ||||| || || || |||||
Sbjct 37654 ATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATGCCCTCCTT 37713
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| || || || | || || || || || |||||| | ||| || |||| || ||
Sbjct 37714 GTCCTGGATTTTCGACTTCACGTTGTCGATGGTATCAGACGATTCAACCTCCAGTGTGAT 37773
Query 82775 CGTCTTGCCTGT 82786
||||| || ||
Sbjct 37774 GGTCTTTCCCGT 37785
>seq1
Length=3245857
Score = 84.2 bits (92), Expect = 4e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| || | ||| | || || | ||| || ||||| || ||||| || || || || ||
Sbjct 3091583 ACCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 3091524
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
||| | | || || || || ||||| ||||||||||| || | ||||| ||||| ||
Sbjct 3091523 GAGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGG 3091464
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| || ||||| || || ||||| | || || || || || || || || || ||
Sbjct 3091463 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAAC 3091404
Query 82763 TTCCAAAGTTATCGTCTTGCCTGT 82786
|| | || || || ||||| ||
Sbjct 3091403 CTCGAGGGTGATGGTTTTGCCCGT 3091380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826470379662
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |