Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq15 95.1 1e-14 seq1 89.7 5e-13 >seq15 Length=579413 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| |||||||| || || ||| | ||||| | ||||||||| Sbjct 37898 GTAGACTCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCCATCCTCCAACTGCTTGCCG 37957 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || ||||||||||| || ||||| || |||||||| ||| || || Sbjct 37958 GCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATTTTGGATTTC 38017 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || || | | |||||| || | || | ||| || ||||| ||||| Sbjct 38018 ACATTGTCTATGGTATCCGAAGACTCCACCTCAAGAGTAATGGTCTTTCCGGTAAGAGTC 38077 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 38078 TTGACGAAGATCTGCAT 38094 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 || || || ||||| |||||||| |||||||| || || || ||||||||| || ||| Sbjct 218574 AGACATGCGAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTC 218515 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 | |||||||||| || | |||| | |||| |||| || ||| || || ||| Sbjct 218514 AATCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAG 218455 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCG--CCGTCTTGC 120817 || | ||||| ||| ||||||||||| | || ||||| || |||| | || | | Sbjct 218454 AAGATACCCTCAACGGCGGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCGCTCAT-C 218396 Query 120818 TGTCGATCCACTTCATGGCCCACTCGGCCTTTTTG 120852 | ||||||||| | ||||| | ||| || ||| Sbjct 218395 AG-AGATCCACTTGAGAGCCCAGTTGGCTTTCTTG 218362 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACG--AGTCCTCGAGCTGCTTGC 133521 || ||||||||||| |||||||| | || | | | || ||| || |||||||| | Sbjct 38126 GTCGACTCTTTCTGGATATTGTAGT--CCGAGAGGGTTCGGCCGTCTTCCAGCTGCTTTC 38183 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||| ||||| || ||||| || || ||||| ||||| | Sbjct 38184 CGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCCTGAATCTTCGATT 38243 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | | ||| || || | |||| ||| || ||||| |||| Sbjct 38244 TCACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTTCCGGTAAGAG 38303 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 38304 TCTTGACGAAGATCTGCAT 38322 >seq1 Length=3245857 Score = 89.7 bits (98), Expect = 5e-13 Identities = 128/178 (72%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| ||| | || | | | ||||||||||| || | Sbjct 3091553 GGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCA-TCCTCGAGCTGTTTAC 3091495 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||| ||||| ||||| || ||||| || |||||||| |||||| || Sbjct 3091494 CAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGGACT 3091435 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639 ||| | || | ||||| | | ||| || |||| ||||| ||||||||| || || Sbjct 3091434 TGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTAAG 3091377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420449519920