Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq15 105 2e-17 >seq15 Length=579413 Score = 105 bits (116), Expect = 2e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 206191 CTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAG 206250 || || ||||| || ||||| |||| || ||| ||||| || |||| || ||| Sbjct 37788 CTAACGGGAAAGACCATCACACTGGAGGTTGAATCGTCTGATACCATCGACAACGTGAAG 37729 Query 206251 CAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGA 206310 || || || || || || || ||| || ||| || || | ||||| ||||| Sbjct 37728 TCGAAAATCCAGGACAAGGAGGGCATTCCCCCAGACCAACAGAGGTTGATCTTTGCCGGG 37669 Query 206311 AAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370 ||||||||||| |||||||||||| | | || |||||| |||| ||||| |||||||| Sbjct 37668 AAGCAGTTGGAGGATGGAAGGACTCTTTCGGACTACAACATCCAAAAAGAATCTACTCTA 37609 Query 206371 CACCTTGT 206378 |||||||| Sbjct 37608 CACCTTGT 37601 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || ||||| || |||||| | || || || ||||||| Sbjct 38319 CAGATCTTCGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAGGTTGAGTCTTCTGAC 38260 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || || |||||||| || ||||| || || || ||| || Sbjct 38259 ACCATCGACAATGTGAAATCGAAGATTCAGGACAAAGAGGGTATCCCCCCAGACCAACAG 38200 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||||||||||||| ||||||| || | || | | || ||||| || Sbjct 38199 CGTCTGATCTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTCTCGGACTACAATATC 38140 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||||||||| || |||||| Sbjct 38139 CAGAAAGAGTCGACGCTTCAC 38119 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || ||||| || || ||| | || ||||| ||| || Sbjct 38091 CAGATCTTCGTCAAGACTCTTACCGGAAAGACCATTACTCTTGAGGTGGAGTCTTCGGAT 38032 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | || || ||| | ||| || || || || || || || || ||| || Sbjct 38031 ACCATAGACAATGTGAAATCCAAA-ATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCA 37973 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | || ||||||||||| ||||||||||| ||||| | |||||| | || ||||| | Sbjct 37972 GCGTCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGGCGCACTTTGTCGGACTACAATAT 37913 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||| |||||||| ||||| ||||| Sbjct 37912 CCAGAAGGAGTCTACACTTCATCTTGT 37886 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||| ||||| |||||||| ||||||| ||| ||||| | |||||| | ||||| ||| Sbjct 37886 ACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCCATCCTCC 37945 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | |||||| ||||||||||| || || || || Sbjct 37946 AACTGCTTGCCGGCGAAGATCAGACGCTGCTG 37977 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||| |||||||| ||||| |||| || ||||| | | |||||||||||| ||| Sbjct 37601 ACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTCCTTCCATCCTCC 37660 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | |||||| ||||| ||||| | || ||||| Sbjct 37661 AACTGCTTCCCGGCAAAGATCAACCTCTGTTG 37692 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 204769 GTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 204828 |||||| || ||||||||||||| ||| ||||| | | || | || ||||||||||| Sbjct 38119 GTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCCAGCTG 38178 Query 204829 CTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||||||||||||| || || ||||| Sbjct 38179 CTTTCCGGCGAAGATCAGACGCTGTTG 38205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819921759418