Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq15 165 1e-34 seq5 114 2e-19 >seq15 Length=579413 Score = 165 bits (182), Expect = 1e-34 Identities = 199/263 (76%), Gaps = 11/263 (4%) Strand=Plus/Plus Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || |||||||||||||| |||||||| |||||||||||||||||| |||||||||| | | Sbjct 218255 GAGAACATCCACTCTGAGACCTACTCCCTCCTGATCGACACCTACATCAAGGACCCCG-C 218313 Query 1456075 GAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGA 1456133 | |||| ||||||| ||||||||||| | || | | || || ||| | Sbjct 218314 CCGCCGGACTTACCTCTTCGAAGCCATCGACACCATCCCCTGCATTGCCAAGAAAGCCAA 218373 Query 1456134 CTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGC 1456193 |||||| | ||||||||| | ||| | ||||| ||||||||| || || ||| | Sbjct 218374 CTGGGCTCTCAAGTGGATCTCTGATGAGCG-ATCGAC-CTTTGCCGAACGACTAATCGCC 218431 Query 1456194 TTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG---CCATCTTTTGGCTC 1456249 ||||||| ||| ||||| ||||| ||||| | ||| || || ||||||| ||||| Sbjct 218432 TTTGCCGCCGTTGAGGGTATCTTCTTCTC---CGGTTCCTTCGCTTCCATCTTCTGGCTG 218488 Query 1456250 AAGAAGCGCGGCCTCATGCCCGG 1456272 |||||||| || ||||||||||| Sbjct 218489 AAGAAGCGTGGTCTCATGCCCGG 218511 >seq5 Length=1078720 Score = 114 bits (126), Expect = 2e-19 Identities = 179/254 (70%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 259930 GCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAA 259989 ||| || || || || || || | | | |||| || || || || || | | |||| Sbjct 587223 GCTTTTCAACGCTGGTACTCCTCACGCTCAGATGTCTTCATGTTTCCTCGTCGCCATGCG 587282 Query 259990 GGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGC 260049 || || || || ||||||||||| ||||| |||||| || || | ||||||||| | Sbjct 587283 GGATGACTCTATTGAGGGCATCTACGACACTCTCAAGACCTGTGCTCAGATCTCCAAGAC 587342 Query 260050 GGCCGGCGGCATCGGTTTTGCCGCA--CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCG 260107 ||||| || || ||| | || || ||||| | || ||| ||| | ||| | || Sbjct 587343 CGCCGGTGGTATTGGTCT--CCACATCCACAACATCCGTGCCAAGGGTTCATACATTGCC 587400 Query 260108 GGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCG 260167 |||||||||||| | || ||||| | || |||||||| || | ||| ||| ||| || Sbjct 587401 GGCACCAACGGCTACTCTAACGGTATCGTCCCCATGCTGCGAGCCTTTGACGCCACAGCT 587460 Query 260168 CGCTACGTCGACCA 260181 || ||||||||||| Sbjct 587461 CGTTACGTCGACCA 587474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177805605793396