Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq15 107 2e-18 seq1 93.3 4e-14 seq12 89.7 5e-13 >seq15 Length=579413 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| |||| || || || || || || ||||| || || |||||||| | | Sbjct 37868 CCACCACGGAGACGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGAC 37927 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | || | || || | ||| ||||| || || |||| ||||||||| || || || Sbjct 37928 AAAG-TGCGCCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 37986 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || || || ||||| ||| || ||| | || || || || ||||| Sbjct 37987 GATACCCTCCTTGTCCTGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCAC 38046 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||||||||| || ||||| | ||| || ||||| || ||||| Sbjct 38047 CTCAAGAGTAATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094 Score = 104 bits (114), Expect = 2e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 ||| || ||||| || || || |||||||||||||| || || || || ||||| || || Sbjct 38443 GTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATGCCCTCCTT 38502 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 || ||||| || ||||| ||| | ||||| || || || || || ||||| || Sbjct 38503 GTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGACTCGACCTCCAGAGTGAT 38562 Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||| || ||||| | || |||||||| ||||||||| Sbjct 38563 GGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCATT 38599 >seq1 Length=3245857 Score = 93.3 bits (102), Expect = 4e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTC 134560 |||||| ||||| || || || ||||| || |||||||||||| | || | || Sbjct 3091568 CAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCATC 3091509 Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620 ||||||||||| || ||||| || | |||||| || || || || || || || || || Sbjct 3091508 CTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTGTC 3091449 Query 134621 TTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGT 134680 || || || ||||| ||| | ||||| || || || || ||||| || ||||| Sbjct 3091448 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGT 3091389 Query 134681 TTTACCGGT 134689 ||| || || Sbjct 3091388 TTTGCCCGT 3091380 >seq12 Length=702644 Score = 89.7 bits (98), Expect = 5e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617 ||| ||||||||||| || || |||||||| |||||||| || || || || || ||||| Sbjct 575067 GTCCTCGAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGGATACCCTCTTT 575008 Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677 || || ||||| |||||| ||| | ||||| || || || || ||||| || || Sbjct 575007 GTCCTGGATTTTGGATTTGACATTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGAT 574948 Query 134678 GGTTTTACCGGT 134689 ||| || || || Sbjct 574947 GGTCTTGCCCGT 574936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398033586160