Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq15 109 5e-19
seq1 96.9 3e-15
>seq15
Length=579413
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||| || ||||| || ||||||||||| | | | || |||||||
Sbjct 38114 ACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCC 38173
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || |||||| | || ||||||||||| || || || | ||||||||| ||
Sbjct 38174 AGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCCTGA 38233
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| ||||| | || | ||||| | | ||||| || ||||| || | ||
Sbjct 38234 ATCTTCGATTTCACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTT 38293
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || ||||| || || ||||| ||||||
Sbjct 38294 CCGGTAAGAGTCTTGACGAAGATCTGCATA 38323
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| || | ||| | ||||| || || || ||||||||||| || ||||| |
Sbjct 37880 CGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCCA 37939
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
|| || | ||| || |||||| | || |||||||| || || || || | |||||| ||
Sbjct 37940 TCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTG 37999
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||| ||| ||||| | |||| || || | | || || || ||||| ||
Sbjct 38000 TCCTGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACCTCAAGAGTAATG 38059
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| || || || ||||| || || ||||| ||||||
Sbjct 38060 GTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCATA 38095
Score = 82.4 bits (90), Expect = 6e-11
Identities = 125/178 (70%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 27070 TGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTT 27129
|||||||| || | | || |||| || ||||| || || ||| |||| | ||||||||
Sbjct 38421 TGTAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTT 38480
Query 27130 GATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG 27189
| || || || | ||||| || || |||||| || | | | || | |||||||
Sbjct 38481 GGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTG 38540
Query 27190 TGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || ||||| || | ||||| || || || || || |||||||||||
Sbjct 38541 AGGACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCAT 38598
>seq1
Length=3245857
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || ||||||| ||| |||| || | ||||| || || || || |||||||||
Sbjct 3091582 CCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3091523
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || | || |||||||||||||| || | |||||||||||||| || || ||
Sbjct 3091522 AGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGG 3091463
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| |||||| || || ||||||| || | | | || | ||||| | | |||||
Sbjct 3091462 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACC 3091403
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAG 27226
|| || || || | ||||||||| ||
Sbjct 3091402 TCGAGGGTGATGGTTTTGCCCGTAAG 3091377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934099624496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |