Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq15 109 5e-19 seq1 96.9 3e-15 >seq15 Length=579413 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||| || ||||| || ||||||||||| | | | || ||||||| Sbjct 38114 ACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCC 38173 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || |||||| | || ||||||||||| || || || | ||||||||| || Sbjct 38174 AGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCCTGA 38233 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||||| | || | ||||| | | ||||| || ||||| || | || Sbjct 38234 ATCTTCGATTTCACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTT 38293 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || ||||| || || ||||| |||||| Sbjct 38294 CCGGTAAGAGTCTTGACGAAGATCTGCATA 38323 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| || | ||| | ||||| || || || ||||||||||| || ||||| | Sbjct 37880 CGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCCA 37939 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || | ||| || |||||| | || |||||||| || || || || | |||||| || Sbjct 37940 TCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTG 37999 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| ||| ||||| | |||| || || | | || || || ||||| || Sbjct 38000 TCCTGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACCTCAAGAGTAATG 38059 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || ||||| || || ||||| |||||| Sbjct 38060 GTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCATA 38095 Score = 82.4 bits (90), Expect = 6e-11 Identities = 125/178 (70%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 27070 TGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTT 27129 |||||||| || | | || |||| || ||||| || || ||| |||| | |||||||| Sbjct 38421 TGTAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTT 38480 Query 27130 GATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG 27189 | || || || | ||||| || || |||||| || | | | || | ||||||| Sbjct 38481 GGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTG 38540 Query 27190 TGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || ||||| || | ||||| || || || || || ||||||||||| Sbjct 38541 AGGACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCAT 38598 >seq1 Length=3245857 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||||| ||| |||| || | ||||| || || || || ||||||||| Sbjct 3091582 CCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 3091523 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | || |||||||||||||| || | |||||||||||||| || || || Sbjct 3091522 AGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGG 3091463 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || ||||||| || | | | || | ||||| | | ||||| Sbjct 3091462 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACC 3091403 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAG 27226 || || || || | ||||||||| || Sbjct 3091402 TCGAGGGTGATGGTTTTGCCCGTAAG 3091377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934099624496