Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq15 116 5e-21
seq7 114 2e-20
seq6 91.5 2e-13
>seq15
Length=579413
Score = 116 bits (128), Expect = 5e-21
Identities = 166/231 (72%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
||| |||||||| |||||||| || || || || |||||| | || |||||||||||
Sbjct 218557 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACC 218498
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789
|||||||||| ||| | || | ||| || |||||||||||||||||||| ||
Sbjct 218497 ACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 218438
Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCA---AACCATTTCAT 122846
||||| || | || |||||||| |||| ||| | ||||| | ||| || |
Sbjct 218437 GGCAAAGGCGATTAGTCGTTCGGCAAAGG-TCGATCGCT--CATCAGAGATCCACTTGAG 218381
Query 122847 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 122897
||||| || || ||||| |||| || || | || | ||||||||| ||
Sbjct 218380 AGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCGAA 218330
>seq7
Length=1014673
Score = 114 bits (126), Expect = 2e-20
Identities = 247/360 (69%), Gaps = 7/360 (2%)
Strand=Plus/Plus
Query 9160 TCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGG 9219
||||||| || ||| |||| || ||| ||||| || || | || || | |||
Sbjct 187369 TCTATCAGGCTTCTACCTCTGAATTGTACGGTAAAGTGGTCGAAACCCCGCAGACAGAGA 187428
Query 9220 AGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCG 9279
||| || |||||||| | ||| ||||| || |||| | ||| ||| |||
Sbjct 187429 CGACCCCATTCTACCCTAGGTCGCCATACGGCGTGGCAAAACTGTACGCATTCTGGATCG 187488
Query 9280 TCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATG 9339
|| |||||||| || || || ||| |||| | ||| ||| || || |||||||| |
Sbjct 187489 TCGTCAATTACCGGGAATCATATGGAATGTTCACATGCAACGGGATTCTGTTCAACCACG 187548
Query 9340 AATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTAC-CGAG-GGTATCAAACA 9397
| ||||| | |||||| | ||||| || |||||| | |||| |||| | | |
Sbjct 187549 AGTCACCTCGCCGAGGTCGAACATTTGTAACACGAAAGATTTCTCGAGCGGTAGCCGAAA 187608
Query 9398 AATCATGAAGGGTGAAAAGGAGTTCATTGAATT-GGGTAACATAAACGCGGAGAGAGATT 9456
| | || |||| | || || ||||| ||| ||| || || | || | |||||||
Sbjct 187609 TAGC-TGCAGGGAAACTAG-AGA-CATTGTATTTGGGGAATATCCATTCGAAAAGAGATT 187665
Query 9457 GGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCG 9516
|||| || || || |||||||| |||| |||||||| ||||| |||||||| ||||||
Sbjct 187666 GGGGCCATGCTAAAGACTATGTGGAAGGAATGTGGCTGATGCTCCAACAAGA-CAAGCCG 187724
>seq6
Length=994530
Score = 91.5 bits (100), Expect = 2e-13
Identities = 214/320 (67%), Gaps = 5/320 (2%)
Strand=Plus/Plus
Query 11538 CAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTG 11597
|||| || |||||||| ||||| ||||| | |||| |||| |||||| ||| | |
Sbjct 407639 CAAAACCGTCCATCTCAACAAGTAACTGATTCAATGTTGACTCTCGCTCATCGTTTCC-G 407697
Query 11598 GCATACCACCAGCACT-GCGTTGC---TTGCCCACCGCATCAATCTCATCAATGAAGACA 11653
|| | | || || || | | || || | || || ||||| || |||||||
Sbjct 407698 CCAAATTGTCCGCCCTTGCCTCGAGCTTTACCGATGGCGTCGATCTCGTCGATGAAGATG 407757
Query 11654 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACA 11713
||||| || || || ||| || |||||||||| ||||| || | ||| |||
Sbjct 407758 ATACACGGCGCATGTTTCTTTGCGTTTGCAAAGAGATCTCGAACTCTGGAAGGACCGACA 407817
Query 11714 CCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCA 11773
|| ||||||||||||||||| | | | || | || ||| || || | | |||
Sbjct 407818 CCGACAAACATCTCCACAAATTCGGAACCGGATACCGAGAGGAAGGGTACCTGAGCCTCA 407877
Query 11774 CCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCG 11833
|| || |||| ||| || ||||| || || ||||| || ||| | ||| | ||
Sbjct 407878 CCAGCCGTGGCCTTGGCTAGCAGGGTTTTACCGGTACCGGGAGGACCAGAGAGGATAGCT 407937
Query 11834 CCTCGGGGGATCTTGGCACC 11853
||||| ||||| ||||| ||
Sbjct 407938 CCTCGAGGGATTTTGGCGCC 407957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031544676800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |