Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq15 116 5e-21 seq7 114 2e-20 seq6 91.5 2e-13 >seq15 Length=579413 Score = 116 bits (128), Expect = 5e-21 Identities = 166/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| |||||||| |||||||| || || || || |||||| | || ||||||||||| Sbjct 218557 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACC 218498 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||||| ||| | || | ||| || |||||||||||||||||||| || Sbjct 218497 ACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 218438 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCA---AACCATTTCAT 122846 ||||| || | || |||||||| |||| ||| | ||||| | ||| || | Sbjct 218437 GGCAAAGGCGATTAGTCGTTCGGCAAAGG-TCGATCGCT--CATCAGAGATCCACTTGAG 218381 Query 122847 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 122897 ||||| || || ||||| |||| || || | || | ||||||||| || Sbjct 218380 AGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCGAA 218330 >seq7 Length=1014673 Score = 114 bits (126), Expect = 2e-20 Identities = 247/360 (69%), Gaps = 7/360 (2%) Strand=Plus/Plus Query 9160 TCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGG 9219 ||||||| || ||| |||| || ||| ||||| || || | || || | ||| Sbjct 187369 TCTATCAGGCTTCTACCTCTGAATTGTACGGTAAAGTGGTCGAAACCCCGCAGACAGAGA 187428 Query 9220 AGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCG 9279 ||| || |||||||| | ||| ||||| || |||| | ||| ||| ||| Sbjct 187429 CGACCCCATTCTACCCTAGGTCGCCATACGGCGTGGCAAAACTGTACGCATTCTGGATCG 187488 Query 9280 TCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATG 9339 || |||||||| || || || ||| |||| | ||| ||| || || |||||||| | Sbjct 187489 TCGTCAATTACCGGGAATCATATGGAATGTTCACATGCAACGGGATTCTGTTCAACCACG 187548 Query 9340 AATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTAC-CGAG-GGTATCAAACA 9397 | ||||| | |||||| | ||||| || |||||| | |||| |||| | | | Sbjct 187549 AGTCACCTCGCCGAGGTCGAACATTTGTAACACGAAAGATTTCTCGAGCGGTAGCCGAAA 187608 Query 9398 AATCATGAAGGGTGAAAAGGAGTTCATTGAATT-GGGTAACATAAACGCGGAGAGAGATT 9456 | | || |||| | || || ||||| ||| ||| || || | || | ||||||| Sbjct 187609 TAGC-TGCAGGGAAACTAG-AGA-CATTGTATTTGGGGAATATCCATTCGAAAAGAGATT 187665 Query 9457 GGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCG 9516 |||| || || || |||||||| |||| |||||||| ||||| |||||||| |||||| Sbjct 187666 GGGGCCATGCTAAAGACTATGTGGAAGGAATGTGGCTGATGCTCCAACAAGA-CAAGCCG 187724 >seq6 Length=994530 Score = 91.5 bits (100), Expect = 2e-13 Identities = 214/320 (67%), Gaps = 5/320 (2%) Strand=Plus/Plus Query 11538 CAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTG 11597 |||| || |||||||| ||||| ||||| | |||| |||| |||||| ||| | | Sbjct 407639 CAAAACCGTCCATCTCAACAAGTAACTGATTCAATGTTGACTCTCGCTCATCGTTTCC-G 407697 Query 11598 GCATACCACCAGCACT-GCGTTGC---TTGCCCACCGCATCAATCTCATCAATGAAGACA 11653 || | | || || || | | || || | || || ||||| || ||||||| Sbjct 407698 CCAAATTGTCCGCCCTTGCCTCGAGCTTTACCGATGGCGTCGATCTCGTCGATGAAGATG 407757 Query 11654 ATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACA 11713 ||||| || || || ||| || |||||||||| ||||| || | ||| ||| Sbjct 407758 ATACACGGCGCATGTTTCTTTGCGTTTGCAAAGAGATCTCGAACTCTGGAAGGACCGACA 407817 Query 11714 CCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCA 11773 || ||||||||||||||||| | | | || | || ||| || || | | ||| Sbjct 407818 CCGACAAACATCTCCACAAATTCGGAACCGGATACCGAGAGGAAGGGTACCTGAGCCTCA 407877 Query 11774 CCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCG 11833 || || |||| ||| || ||||| || || ||||| || ||| | ||| | || Sbjct 407878 CCAGCCGTGGCCTTGGCTAGCAGGGTTTTACCGGTACCGGGAGGACCAGAGAGGATAGCT 407937 Query 11834 CCTCGGGGGATCTTGGCACC 11853 ||||| ||||| ||||| || Sbjct 407938 CCTCGAGGGATTTTGGCGCC 407957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031544676800