Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 127 3e-24 seq15 114 2e-20 seq6 91.5 2e-13 >seq5 Length=1078720 Score = 127 bits (140), Expect = 3e-24 Identities = 484/754 (64%), Gaps = 23/754 (3%) Strand=Plus/Minus Query 118703 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 118762 ||| || || | || |||| || || |||| | |||||| | | |||||| || Sbjct 587967 AGGGAGAGCCAGGGATGCCAAGTTGCAAACAGCGACCTCATCAGGGGCGGAGTACTCAAT 587908 Query 118763 AATTTCCGTGCACAAGTTTGAACTC---TTAATGGTGCCCAAGTTCTTTTGATTTGACTT 118819 ||||| || |||||||| |||| || || || || | | | || || ||||| Sbjct 587907 GATTTCGGTACACAAGTT---ACTCGATTTGATAGTACCGAGATGTTGCTGGTTGGACTT 587851 Query 118820 TGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAG 118879 | || |||||||||||||||||| | || | || ||||| ||||| | || ||| Sbjct 587850 GGCATTGGCAGCATCCTTGTAAAGCATGAAGGGGTTACCGGTCTCGGTTTGAGCCTCGAG 587791 Query 118880 AATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCT------CTTC 118933 || || ||| | | ||| | ||| ||| || |||| | | Sbjct 587790 GATGGCAAACCAAAGTTTCTGGGCTTTGA---TGGTCTTG---CGACCCTTACCGGCCTT 587737 Query 118934 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 118993 ||||||| |||||| |||||||||||| | | || | ||| ||||| Sbjct 587736 CTCGTACGACTCGTAGAGCTTTTCAAACTCTTCGGAGTGGACATCGGCGAGGCCTGGGCA 587677 Query 118994 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 119053 || | || || | |||| ||| | || | || || |||||||||||||| || Sbjct 587676 CTCGGCCGGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATGAAGAGATC 587617 Query 119054 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 119113 || ||||| || || |||| | || | || |||| || | || || || Sbjct 587616 GGGAATCCAAAGGGCGTAGAACAAGTCTCTTGCTCGGACTTCCTCTTTTCCGTGGTTCTT 587557 Query 119114 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 119173 |||||| |||| ||||| | || ||| || ||||| || || ||||| | || | | Sbjct 587556 ACGCAAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGC 587497 Query 119174 CCCCTTACGACG---ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAG 119230 || || |||| | |||| || || | || ||||||| ||| | || || Sbjct 587496 ACCGGGGCGCTTGTTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAG 587437 Query 119231 CATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCT 119290 ||| || | |||||| | || | ||| || || || ||| || ||||| | Sbjct 587436 CATGGGGACGATACCGTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACG 587377 Query 119291 GACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGT 119350 || | ||||||||| | ||||||||| || || ||| ||||| || || || | | Sbjct 587376 GATGTTGTGGATGTGGAGACCAATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTT 587317 Query 119351 GAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGA 119410 |||| || ||||||| || || || |||||| || | |||| |||||| || || Sbjct 587316 GAGAGTGTCGTAGATGCCCTCAATAGAGTCATCCCGCATGGCGACGAGGAAACATGAAGA 587257 Query 119411 CATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAG 119443 ||| |||| | || || |||||||||||||| || Sbjct 587256 CATCTGAG-CGTGAGGAGTACCAGCGTTGAAAAG 587224 >seq15 Length=579413 Score = 114 bits (126), Expect = 2e-20 Identities = 169/237 (71%), Gaps = 12/237 (5%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| ||||||||||| ||||||||||| || || |||||| || || ||||||||||| Sbjct 218557 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACC 218498 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||||| |||||| || | | || || || ||||||||||| ||||| || Sbjct 218497 ACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 218438 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAG---GAGCGGGACTTTGTATCA---AACCACTT 130200 || || || | || || || |||||| || || || |||| | |||||| Sbjct 218437 GGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCG---CT---CATCAGAGATCCACTT 218384 Query 130201 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 | ||||| | || || || | || || |||| ||| | ||| ||||| ||||| Sbjct 218383 GAGAGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCGAAGAG 218327 >seq6 Length=994530 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 14234 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACT 14293 ||||||| |||||| || || |||||||| | |||||| || || || || | Sbjct 407725 TTACCGATGGCGTCGATCTCGTCGATGAAGATGATACACGGCGCATGTTTCTTTGCGTTT 407784 Query 14294 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCG 14353 |||||| |||||| ||||| | ||||||||| ||||||||||||||||| | || Sbjct 407785 GCAAAGAGATCTCGAACTCTGGAAGGACCGACACCGACAAACATCTCCACAAATTCGGAA 407844 Query 14354 GCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 14413 |||| || |||||| || | || ||||| || |||| ||| || ||||| Sbjct 407845 CCGGATACCGAGAGGAAGGGTACCTGAGCCTCACCAGCCGTGGCCTTGGCTAGCAGGGTT 407904 Query 14414 TTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 || || || || || || | ||| | || || || ||||| |||| || Sbjct 407905 TTACCGGTACCGGGAGGACCAGAGAGGATAGCTCCTCGAGGGATTTTGGCGCC 407957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434751634480