Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5 127 3e-24
seq15 114 2e-20
seq6 91.5 2e-13
>seq5
Length=1078720
Score = 127 bits (140), Expect = 3e-24
Identities = 484/754 (64%), Gaps = 23/754 (3%)
Strand=Plus/Minus
Query 118703 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 118762
||| || || | || |||| || || |||| | |||||| | | |||||| ||
Sbjct 587967 AGGGAGAGCCAGGGATGCCAAGTTGCAAACAGCGACCTCATCAGGGGCGGAGTACTCAAT 587908
Query 118763 AATTTCCGTGCACAAGTTTGAACTC---TTAATGGTGCCCAAGTTCTTTTGATTTGACTT 118819
||||| || |||||||| |||| || || || || | | | || || |||||
Sbjct 587907 GATTTCGGTACACAAGTT---ACTCGATTTGATAGTACCGAGATGTTGCTGGTTGGACTT 587851
Query 118820 TGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAG 118879
| || |||||||||||||||||| | || | || ||||| ||||| | || |||
Sbjct 587850 GGCATTGGCAGCATCCTTGTAAAGCATGAAGGGGTTACCGGTCTCGGTTTGAGCCTCGAG 587791
Query 118880 AATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCT------CTTC 118933
|| || ||| | | ||| | ||| ||| || |||| | |
Sbjct 587790 GATGGCAAACCAAAGTTTCTGGGCTTTGA---TGGTCTTG---CGACCCTTACCGGCCTT 587737
Query 118934 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 118993
||||||| |||||| |||||||||||| | | || | ||| |||||
Sbjct 587736 CTCGTACGACTCGTAGAGCTTTTCAAACTCTTCGGAGTGGACATCGGCGAGGCCTGGGCA 587677
Query 118994 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 119053
|| | || || | |||| ||| | || | || || |||||||||||||| ||
Sbjct 587676 CTCGGCCGGACACATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATGAAGAGATC 587617
Query 119054 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 119113
|| ||||| || || |||| | || | || |||| || | || || ||
Sbjct 587616 GGGAATCCAAAGGGCGTAGAACAAGTCTCTTGCTCGGACTTCCTCTTTTCCGTGGTTCTT 587557
Query 119114 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 119173
|||||| |||| ||||| | || ||| || ||||| || || ||||| | || | |
Sbjct 587556 ACGCAAGTCCAGGAAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGC 587497
Query 119174 CCCCTTACGACG---ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAG 119230
|| || |||| | |||| || || | || ||||||| ||| | || ||
Sbjct 587496 ACCGGGGCGCTTGTTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAG 587437
Query 119231 CATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCT 119290
||| || | |||||| | || | ||| || || || ||| || ||||| |
Sbjct 587436 CATGGGGACGATACCGTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACG 587377
Query 119291 GACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGT 119350
|| | ||||||||| | ||||||||| || || ||| ||||| || || || | |
Sbjct 587376 GATGTTGTGGATGTGGAGACCAATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTT 587317
Query 119351 GAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGA 119410
|||| || ||||||| || || || |||||| || | |||| |||||| || ||
Sbjct 587316 GAGAGTGTCGTAGATGCCCTCAATAGAGTCATCCCGCATGGCGACGAGGAAACATGAAGA 587257
Query 119411 CATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAG 119443
||| |||| | || || |||||||||||||| ||
Sbjct 587256 CATCTGAG-CGTGAGGAGTACCAGCGTTGAAAAG 587224
>seq15
Length=579413
Score = 114 bits (126), Expect = 2e-20
Identities = 169/237 (71%), Gaps = 12/237 (5%)
Strand=Plus/Minus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| ||||||||||| ||||||||||| || || |||||| || || |||||||||||
Sbjct 218557 GTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATGAGACC 218498
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|||||||||| |||||| || | | || || || ||||||||||| ||||| ||
Sbjct 218497 ACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 218438
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAG---GAGCGGGACTTTGTATCA---AACCACTT 130200
|| || || | || || || |||||| || || || |||| | ||||||
Sbjct 218437 GGCAAAGGCGATTAGTCGTTCGGCAAAGGTCGATCG---CT---CATCAGAGATCCACTT 218384
Query 130201 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257
| ||||| | || || || | || || |||| ||| | ||| ||||| |||||
Sbjct 218383 GAGAGCCCAGTTGGCTTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTTCGAAGAG 218327
>seq6
Length=994530
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 14234 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACT 14293
||||||| |||||| || || |||||||| | |||||| || || || || |
Sbjct 407725 TTACCGATGGCGTCGATCTCGTCGATGAAGATGATACACGGCGCATGTTTCTTTGCGTTT 407784
Query 14294 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCG 14353
|||||| |||||| ||||| | ||||||||| ||||||||||||||||| | ||
Sbjct 407785 GCAAAGAGATCTCGAACTCTGGAAGGACCGACACCGACAAACATCTCCACAAATTCGGAA 407844
Query 14354 GCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 14413
|||| || |||||| || | || ||||| || |||| ||| || |||||
Sbjct 407845 CCGGATACCGAGAGGAAGGGTACCTGAGCCTCACCAGCCGTGGCCTTGGCTAGCAGGGTT 407904
Query 14414 TTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466
|| || || || || || | ||| | || || || ||||| |||| ||
Sbjct 407905 TTACCGGTACCGGGAGGACCAGAGAGGATAGCTCCTCGAGGGATTTTGGCGCC 407957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434751634480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |