Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq15 143 3e-29 seq7 116 4e-21 seq6 84.2 3e-11 >seq15 Length=579413 Score = 143 bits (158), Expect = 3e-29 Identities = 173/234 (74%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| ||||||||| | || | || || ||| |||||||| | |||||| | ||| Sbjct 218327 CTCTTCGAAGCCATCGACACCATCCCCTGCATTGCCAAGAAAGCCAACTGGGCTCTCAAG 218386 Query 94774 TGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||| | |||| ||| ||||||| || ||||| |||| ||||| ||| Sbjct 218387 TGGATCTCTGATGAGCGATCGA---CCTTTGCCGAACGACTAATCGCCTTTGCCGCCGTT 218443 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 94890 ||||||||||||||||| ||||||||| | || | ||||| |||||||| |||||| Sbjct 218444 GAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTGAAGAAGCGTGGTCTC 218503 Query 94891 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||| || | ||||||||||||||| ||||| || |||||||| || ||| Sbjct 218504 ATGCCCGGATTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCAC 218557 >seq7 Length=1014673 Score = 116 bits (128), Expect = 4e-21 Identities = 246/358 (69%), Gaps = 7/358 (2%) Strand=Plus/Plus Query 7238 TACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAACGAGGAG 7297 || || || || || || || ||| |||||||| ||||| || || | ||| | Sbjct 187371 TATCAGGCTTCTACCTCTGAATTGTACGGTAAAGTGGTCGAAACCCCGCAGACAGAGACG 187430 Query 7298 ACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCGTC 7357 || || |||||||| | ||| ||||| || |||| | ||| ||| ||||| Sbjct 187431 ACCCCATTCTACCCTAGGTCGCCATACGGCGTGGCAAAACTGTACGCATTCTGGATCGTC 187490 Query 7358 AAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATGAA 7417 |||||||| || || || ||| |||| | ||| ||| || || |||||||| || Sbjct 187491 GTCAATTACCGGGAATCATATGGAATGTTCACATGCAACGGGATTCTGTTCAACCACGAG 187550 Query 7418 TCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTAC-CGAG-GGTATCAAACAAA 7475 ||||| | |||||| | ||||| ||| |||||| | |||| |||| | | | | Sbjct 187551 TCACCTCGCCGAGGTCGAACATTTGTAACACGAAAGATTTCTCGAGCGGTAGCCGAAATA 187610 Query 7476 TCATGAAGGGTGAAAAGGAGTTCATTGAATT-GGGTAACATAAACGCGGCGAGAGATTGG 7534 | || |||| | || || ||||| ||| ||| || || | || ||||||||| Sbjct 187611 GC-TGCAGGGAAACTAG-AGA-CATTGTATTTGGGGAATATCCATTCGAAAAGAGATTGG 187667 Query 7535 GGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCG 7592 || || || || |||||||| |||| |||||||| ||||| |||||||| |||||| Sbjct 187668 GGCCATGCTAAAGACTATGTGGAAGGAATGTGGCTGATGCTCCAACAAGA-CAAGCCG 187724 >seq6 Length=994530 Score = 84.2 bits (92), Expect = 3e-11 Identities = 161/236 (68%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 9693 GCTTTCCC-ACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCG 9751 ||||| || | ||| || ||||| || ||||||| ||| || || || || ||| Sbjct 407722 GCTTTACCGATGGCGTCGATCTCGTCGATGAAGATGATACACGGCGCATGTTTCTTTGCG 407781 Query 9752 ACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9811 | |||||||||| || || | | || ||||| ||||||||||||||||| | Sbjct 407782 TTTGCAAAGAGATCTCGAACTCTGGAAGGACCGACACCGACAAACATCTCCACAAATTCG 407841 Query 9812 GCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 | |||| || |||||| || | || ||||| || |||| ||| || || Sbjct 407842 GAACCGGATACCGAGAGGAAGGGTACCTGAGCCTCACCAGCCGTGGCCTTGGCTAGCAGG 407901 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 || ||||| ||||| || ||| | ||||| || ||||| || || |||||||| Sbjct 407902 GTTTTACCGGTACCGGGAGGACCAGAGAGGATAGCTCCTCGAGGGATTTTGGCGCC 407957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260377135920