Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq15 143 3e-29
seq7 116 4e-21
seq6 84.2 3e-11
>seq15
Length=579413
Score = 143 bits (158), Expect = 3e-29
Identities = 173/234 (74%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773
||||| ||||||||| | || | || || ||| |||||||| | |||||| | |||
Sbjct 218327 CTCTTCGAAGCCATCGACACCATCCCCTGCATTGCCAAGAAAGCCAACTGGGCTCTCAAG 218386
Query 94774 TGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830
||| | |||| ||| ||||||| || ||||| |||| ||||| |||
Sbjct 218387 TGGATCTCTGATGAGCGATCGA---CCTTTGCCGAACGACTAATCGCCTTTGCCGCCGTT 218443
Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 94890
||||||||||||||||| ||||||||| | || | ||||| |||||||| ||||||
Sbjct 218444 GAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTGAAGAAGCGTGGTCTC 218503
Query 94891 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
||||| || | ||||||||||||||| ||||| || |||||||| || |||
Sbjct 218504 ATGCCCGGATTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCAC 218557
>seq7
Length=1014673
Score = 116 bits (128), Expect = 4e-21
Identities = 246/358 (69%), Gaps = 7/358 (2%)
Strand=Plus/Plus
Query 7238 TACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAACGAGGAG 7297
|| || || || || || || ||| |||||||| ||||| || || | ||| |
Sbjct 187371 TATCAGGCTTCTACCTCTGAATTGTACGGTAAAGTGGTCGAAACCCCGCAGACAGAGACG 187430
Query 7298 ACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCGTC 7357
|| || |||||||| | ||| ||||| || |||| | ||| ||| |||||
Sbjct 187431 ACCCCATTCTACCCTAGGTCGCCATACGGCGTGGCAAAACTGTACGCATTCTGGATCGTC 187490
Query 7358 AAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATGAA 7417
|||||||| || || || ||| |||| | ||| ||| || || |||||||| ||
Sbjct 187491 GTCAATTACCGGGAATCATATGGAATGTTCACATGCAACGGGATTCTGTTCAACCACGAG 187550
Query 7418 TCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTAC-CGAG-GGTATCAAACAAA 7475
||||| | |||||| | ||||| ||| |||||| | |||| |||| | | | |
Sbjct 187551 TCACCTCGCCGAGGTCGAACATTTGTAACACGAAAGATTTCTCGAGCGGTAGCCGAAATA 187610
Query 7476 TCATGAAGGGTGAAAAGGAGTTCATTGAATT-GGGTAACATAAACGCGGCGAGAGATTGG 7534
| || |||| | || || ||||| ||| ||| || || | || |||||||||
Sbjct 187611 GC-TGCAGGGAAACTAG-AGA-CATTGTATTTGGGGAATATCCATTCGAAAAGAGATTGG 187667
Query 7535 GGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCG 7592
|| || || || |||||||| |||| |||||||| ||||| |||||||| ||||||
Sbjct 187668 GGCCATGCTAAAGACTATGTGGAAGGAATGTGGCTGATGCTCCAACAAGA-CAAGCCG 187724
>seq6
Length=994530
Score = 84.2 bits (92), Expect = 3e-11
Identities = 161/236 (68%), Gaps = 1/236 (0%)
Strand=Plus/Plus
Query 9693 GCTTTCCC-ACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCG 9751
||||| || | ||| || ||||| || ||||||| ||| || || || || |||
Sbjct 407722 GCTTTACCGATGGCGTCGATCTCGTCGATGAAGATGATACACGGCGCATGTTTCTTTGCG 407781
Query 9752 ACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9811
| |||||||||| || || | | || ||||| ||||||||||||||||| |
Sbjct 407782 TTTGCAAAGAGATCTCGAACTCTGGAAGGACCGACACCGACAAACATCTCCACAAATTCG 407841
Query 9812 GCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871
| |||| || |||||| || | || ||||| || |||| ||| || ||
Sbjct 407842 GAACCGGATACCGAGAGGAAGGGTACCTGAGCCTCACCAGCCGTGGCCTTGGCTAGCAGG 407901
Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
|| ||||| ||||| || ||| | ||||| || ||||| || || ||||||||
Sbjct 407902 GTTTTACCGGTACCGGGAGGACCAGAGAGGATAGCTCCTCGAGGGATTTTGGCGCC 407957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260377135920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |