Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3 161 3e-34 seq15 159 1e-33 seq1 95.1 4e-14 seq12 89.7 2e-12 >seq3 Length=1407364 Score = 161 bits (178), Expect = 3e-34 Identities = 257/369 (70%), Gaps = 0/369 (0%) Strand=Plus/Minus Query 349531 ACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTT 349590 ||| || || || || || ||| | | | || |||||||| | ||| || || || | Sbjct 268228 ACCTGAGGAGATCTCCTCCATGATCCTCATCAAGATGAAGGAGACTGCCGAGGCCTACCT 268169 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 |||| || || || | || ||| | ||||| || ||||| || || || ||||||| Sbjct 268168 CGGTGGTACCGTCACCAAGGCCGTTGTCACTGTTCCCGCCTACTTCAACGACTCCCAGCG 268109 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 | || |||||||| ||||| | ||||| || | | || || |||| || || || Sbjct 268108 TCAGGCCACAAAAGACGCTGGTATGATTGCTGGTCTCGACGTCCTCCGAATCATCAACGA 268049 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTAT 349770 ||||| ||||| || || || || || ||||| || | | || || || || | Sbjct 268048 GCCCACCGCTGCCGCTATCGCTTACGGTCTTGACAAGAAGTCCGAGGGCGAGAAGAACGT 267989 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 | | || || ||| | ||||||||||| || ||||| || || || || |||||||||| Sbjct 267988 TTTGATCTTCGATCTCGGTGGTGGTACCTTCGATGTCTCGCTCCTTACTATTGAAGAGGG 267929 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 || || || || || || || |||||||| || || | ||||| || || ||||| || Sbjct 267928 TATCTTCGAGGTCAAGGCCACCGCTGGTGACACCCACTTGGGTGGTGAGGACTTTGACAA 267869 Query 349891 TCGTCTCGT 349899 |||||||| Sbjct 267868 CCGTCTCGT 267860 >seq15 Length=579413 Score = 159 bits (176), Expect = 1e-33 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||||||||| |||||||| || || ||||| || || Sbjct 37864 CATACCACCACGGAGACGCAGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTC 37923 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || |||||||| || | || || || || ||||| ||||| ||||| || || Sbjct 37924 CGACAAAGTGCGCCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG 37983 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| ||||| | ||| ||||| || || | ||| || | || Sbjct 37984 GGGGATACCCTCCTTGTCCTGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTC 38043 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| |||| ||||||||||| || || || || || |||||||| Sbjct 38044 CACCTCAAGAGTAATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094 Score = 150 bits (166), Expect = 5e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||||| || |||||||| || ||||| || || Sbjct 38092 CATACCACCACGGAGACGGAGGACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTC 38151 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| || ||||| || || ||||| || ||||| ||||| || || || || Sbjct 38152 CGAGAGGGTTCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGG 38211 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || ||||| |||||||| || | ||| ||||| || || | ||||| | || Sbjct 38212 GGGGATACCCTCTTTGTCCTGAATCTTCGATTTCACATTGTCGATGGTGTCAGAAGACTC 38271 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| || | ||||||||||| || || || || || |||||||| Sbjct 38272 AACCTCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38322 Score = 104 bits (114), Expect = 7e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 || ||||| | || || || || |||||||| ||||| || ||||| || ||||||||| Sbjct 38706 TAGTCAGACAGAGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATGAGTCGTTGCTGA 38765 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 || || ||||| || ||||| || || || || | || || || ||||| | || || Sbjct 38766 TCTGGGGGAATACCCTCTTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCCGAA 38825 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | ||||||||| || || | ||||||||||| Sbjct 38826 GATTCAACTTCGAGGGTGATGGTCTTTCCGGT 38857 >seq1 Length=3245857 Score = 95.1 bits (104), Expect = 4e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| || || | || || || || |||||||| || || || || || || || Sbjct 3091583 ACCACCACGCAACCTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 3091524 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| || || ||||| ||||||||||| ||||| || || || || || Sbjct 3091523 GAGAGTACGTCCATCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGG 3091464 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || || ||||| || || | || || || || || | || || | ||||| Sbjct 3091463 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAAC 3091404 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAG 140716 || || || | || || || || || Sbjct 3091403 CTCGAGGGTGATGGTTTTGCCCGTAAG 3091377 >seq12 Length=702644 Score = 89.7 bits (98), Expect = 2e-12 Identities = 281/431 (65%), Gaps = 11/431 (3%) Strand=Plus/Minus Query 349601 GTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACA 349660 || ||||| |||| | | ||| || ||||| || || || | || ||| || || Sbjct 314055 GTGACTGA-GCTGACGTCAGTGTCCCCGCCTACTTCAACGACTCGCAACGTCTCGCCACC 313997 Query 349661 AAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCT 349720 || || ||||| |||||| || | | ||||| | || || || || |||||||| Sbjct 313996 AAGGACGCTGGTGCCATTGCCGGTCTTGAGGTTCTCCGTATCATCAACGAGCCCACTGCC 313937 Query 349721 GCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTT 349780 || || ||||| || || ||||| | | || | | || || || | || || || Sbjct 313936 GCTGCCATTGCCTACGGTCTTGACCAGAAGACCAAAGAGGAGAAGAACGTCCTCATCTTC 313877 Query 349781 GATTTAGGTGGTGGTACTTTTGATGTATCACTACT----AACACTTGAAGAGGGAATTTT 349836 ||| | |||||||| ||||| ||||| || || || | |||| | | | | || Sbjct 313876 GATCTCGGTGGTGGAACTTTCGATGTCTCCCTTCTCTCCATCACTGGTGGTG----TCTT 313821 Query 349837 TGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCT 349896 | || || || ||||| ||||| || ||||| ||||| || || || || || || Sbjct 313820 CGCCGTCAAGGCTACTGCCGGTGACACCCATCTCGGTGGTGAGGACTTCGACAACACCCT 313761 Query 349897 CGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATT-GATATTGGAGATAATC 349955 | || ||| || || || ||||| ||||| || | || ||| || | | Sbjct 313760 CCTTGAGCACTTCAAGGCCGAGTTCAAGCG-CAAGCACAAGCTCGACATTTCTGAGGACC 313702 Query 349956 CTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTA 350015 | | || ||||||| || || | || ||||||||||| ||||| || | || || Sbjct 313701 CCCGTGCCCTGCGTCGTCTGAGGTCCGCTTGTGAACGTGCCAAGCGAACCCTCTCCTCCG 313642 Query 350016 CTACCCAAACC 350026 |||||| ||| Sbjct 313641 TTACCCAGACC 313631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253273976574