Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq5 230 3e-55 seq15 122 1e-22 >seq5 Length=1078720 Score = 230 bits (254), Expect = 3e-55 Identities = 497/740 (67%), Gaps = 10/740 (1%) Strand=Plus/Minus Query 79053 CAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGT 79112 ||| ||||||| |||||| || || ||| || ||| || ||| |||||||| || Sbjct 587958 CAGGGATGCCAAGTTGCAAACAGCGACCTCATCAGGGGCGGAGTACTCAATGATTTCGGT 587899 Query 79113 GCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGC 79172 ||||| ||| ||| ||||| || |||| | | ||||||| ||| | || || Sbjct 587898 ACACAAGTTACTCGATTTGATAGTACCGAGATGTTGCTGGTTGGACTTGGCATTGGCAGC 587839 Query 79173 GTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCA 79232 |||||||| |||| | || | |||||||| ||| || ||| | | | ||| Sbjct 587838 ATCCTTGTAAAGCATGAAGGGGTTACCGGTCTCGGTTTGAGCCTCGAGGATGGCAAACCA 587779 Query 79233 GATGTCCCGGGCCCGGACAACCTT----CTTGTACCGACCCTGTGCGACGTACGTCCGGT 79288 | | | |||| || ||| | ||||| || | | |||||| | || Sbjct 587778 AAGTTTCTGGGCTTTGATGGTCTTGCGACCCTTACCGGCCTTCT----CGTACGACTCGT 587723 Query 79289 ACAACTCGTTGAAAGCCTCCCCA-TAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCAC 79347 | | || || ||| || | | | |||||||| ||||| ||||||||| ||| ||| Sbjct 587722 AGAGCTT-TTCAAACTCTTCGGAGTGGACATCGGCGAGGCCTGGGCACTCGGCCGGACAC 587664 Query 79348 ATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGG 79407 ||||| |||||| |||| || || || ||||||||| || || ||||| ||| Sbjct 587663 ATCAGAGTCCAGTCGCCGTCGGATTCGACACGCTTCATGAAGAGATCGGGAATCCAAAGG 587604 Query 79408 GCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGA 79467 || ||| | ||| | || | ||||| | || |||||| ||||| || || Sbjct 587603 GCGTAGAACAAGTCTCTTGCTCGGACTTCCTCTTTTCCGTGGTTCTTACGCAAGTCCAGG 587544 Query 79468 AAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTG 79527 ||||| | || ||||| ||||| ||||| || |||||||| || | ||| ||||||| Sbjct 587543 AAGTCGAAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTG 587484 Query 79528 CCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATG 79587 || || |||| |||||| || || ||| || || |||| |||||||| ||||| Sbjct 587483 TTACCACCTTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAGCATGGGGACGATA 587424 Query 79588 CCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAG 79647 |||| | | |||||| || ||| || || ||| | || || ||||| | | Sbjct 587423 CCGTTAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACGGATGTTGTGGATG 587364 Query 79648 TGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAG 79707 |||| || || || |||| ||||||||| || || || |||||| || |||||| Sbjct 587363 TGGAGACCAATACCACCGGCGGTCTTGGAGATCTGAGCACAGGTCTTGAGAGTGTCGTAG 587304 Query 79708 ATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTG 79767 |||||||| || ||||| ||| ||| ||||| ||||| || |||||||| | || Sbjct 587303 ATGCCCTCAATAGAGTCATCCCGCATGGCGACGAGGAAACATGAAGACATCTGAGCGTGA 587244 Query 79768 TTCGTACCGGCGTTGAAGAG 79787 ||||| |||||||| || Sbjct 587243 GGAGTACCAGCGTTGAAAAG 587224 Score = 208 bits (230), Expect = 8e-49 Identities = 542/822 (66%), Gaps = 26/822 (3%) Strand=Plus/Plus Query 19217 CTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAG 19276 ||||||||||| ||||| || | |||||||| |||||||| || || ||| | Sbjct 587224 CTTTTCAACGCTGGTACTCCTCACGCTCAGATGTCTTCATGTTTCCTCGTCGCCATGCGG 587283 Query 19277 GATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGG 19336 |||||| ||||||||||||||||| || |||||| || || || ||||||||| Sbjct 587284 GATGACTCTATTGAGGGCATCTACGACACTCTCAAGACCTGTGCTCAGATCTCCAAGACC 587343 Query 19337 TCCGGGGGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGG 19396 |||| ||||| || ||||| | || ||||| | | ||| || || || Sbjct 587344 GCCGGTGGTATTGGTCTCCACATCCACAACATCCGTGCCAAGGGTTCATACATTGCCGGC 587403 Query 19397 ACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGG 19456 || ||||| | ||||||||||||| ||||| || | ||| || ||| || | Sbjct 587404 ACCAACGGCTACTCTAACGGTATCGTCCCCATGCTGCGAGCCTTTGACGCCACAGCTCGT 587463 Query 19457 TACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGG 19516 |||||| |||| || || ||| ||| || | || ||||||||||| ||||| ||| Sbjct 587464 TACGTCGACCAAGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCTTGG 587523 Query 19517 CACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGC 19576 || || || ||| | || ||||| || |||| |||||| || | ||||| | || Sbjct 587524 CATGCCGATGTCTTCGACTTCCTGGACTTGCGTAAGAACCACGGAAAAGAGGAAGTCCGA 587583 Query 19577 TGTCGCGACCTCTTC-ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAA 19635 | ||| | ||| ||| |||| |||||||| || || |||||| || || || Sbjct 587584 GCAAGAGACTTGTTCTACGCCCTT-TGGATTCCCGATCTCTTCATGAAGCGTGTCGAATC 587642 Query 19636 GGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGG 19695 |||| || ||| |||||||| ||| ||| ||||| ||||| |||| ||| || Sbjct 587643 CGACGGCGACTGGACTCTGATGTGTCCGGCCGAGTGCCCAGGCCTCGCCGATGTCCACTC 587702 Query 19696 CGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAG------AA 19749 ||| | ||| | || | ||| | | |||| || | ||||||| ||| || Sbjct 587703 CGAAGAGTTTGAAAAGCTCTACGAGTCGTACG-AG---AAGGCCGGT--AAGGGTCGCAA 587756 Query 19750 GGTGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCAC 19809 | || |||| | | | ||| | ||||| | || ||||||||| | Sbjct 587757 GACCATCAAAGCCCAGAAACTTTGGTTTGCCATCCTCGAGGCTCAAACCGAGACCGGTAA 587816 Query 19810 ACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGC 19869 || | |||| |||||||| || || || |||||||| || ||| | | |||| | Sbjct 587817 CCCCTTCATGCTTTACAAGGATGCTGCCAATGCCAAGTCCAACCAGCAACATCTCGGTAC 587876 Query 19870 GATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGC 19929 ||||| ||| ||| ||||||| |||||||| ||| ||| || || ||| || Sbjct 587877 TATCAAATCGAGTAACTTGTGTACCGAAATCATTGAGTACTCCGCCCCTGATGAGGTCGC 587936 Query 19930 CGTGTGTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGT---------CAAGGCCTCCTC 19980 || || || |||| |||||| || || | ||||| ||||| | Sbjct 587937 TGTTTGCAACTTGGCATCCCTGGCTCTCCCTGCGTTCGTCGACATGAGCAAGG---GCGT 587993 Query 19981 CTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCAC 20022 || ||||||| ||| || ||||| | ||| ||||||||| Sbjct 587994 CTACGACTTTAAGAAACTGCACGAGATCACCAAGGTCGTCAC 588035 Score = 123 bits (136), Expect = 3e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 78195 CAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAG 78254 ||| ||||| || ||||| || ||||||||||| ||||| | |||||| | || Sbjct 588935 CAAGTAGTAGCACCCAGTCTTCAGTCCCTTCTTCCAACCGTAGAAGTGCATGGAGGTCAA 588876 Query 78255 CTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGC 78314 || || | |||||| | | |||||| || || ||||||||||||||| | || Sbjct 588875 CTGGGAGAAGGATGGGTTCGCAAGATGGATGTTCAGGGATTGGGACTGGTCGATGAAAGC 588816 Query 78315 ACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTA 78374 ||| |||||||| || | ||||||||| | ||| || | |||||||| | |||| ||| Sbjct 588815 ACCACGGTCGGCAGCAAGGTCGATGACGGCCTTCTGGGAGATCTCCCACACGGTCTTGTA 588756 Query 78375 AATGGCCTTCAGCTCTTCCTGGATGT 78400 || ||||| |||||| || |||||| Sbjct 588755 GATAGCCTTGAGCTCTGCCGGGATGT 588730 Score = 104 bits (114), Expect = 3e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| || |||| |||||| ||||| ||| | |||||| | |||||||| | || Sbjct 588744 CTCAAGGCTATCTACAAGACCGTGTGGGAGATCTCCCAGAAGGCCGTCATCGACCTTGCT 588803 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 ||||| || || || | ||||||||||||||| || || || || | | ||| || Sbjct 588804 GCCGACCGTGGTGCTTTCATCGACCAGTCCCAATCCCTGAACATCCATCTTGCGAACCCA 588863 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | | | || ||| ||||||||| | ||||| ||| | ||||| || ||||| || Sbjct 588864 TCCTTCTCCCAGTTGACCTCCATGCACTTCTACGGTTGGAAGAAGGGACTGAAGACTGGG 588923 Query 20798 ATGTACTATCTGCGGACCCGAGCCAAG-GCCAAGGC 20832 ||||| || ||| || |||| || ||| |||| Sbjct 588924 TGCTACTACTTGAGGA-CCAAGCCTAGTGCCCAGGC 588958 >seq15 Length=579413 Score = 122 bits (134), Expect = 1e-22 Identities = 207/297 (70%), Gaps = 5/297 (2%) Strand=Plus/Plus Query 59826 ATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAG 59885 |||||||| ||||| ||||| ||| ||||||| | | ||||||| || | | Sbjct 218261 ATCCACTCTGAGACCTACTCCCTCCTGATCGACACCTACATCAAGGACCCCGCCCGCCGG 218320 Query 59886 GCTGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGC 59944 || || ||| ||||| || || ||||| ||| | | | ||||| | ||||| Sbjct 218321 ACTTACCTCTTCGAAGCCATCGACACCATCCCCTGCATTGCCA-AGAAAGCCAACTGGGC 218379 Query 59945 CATGCAGTGGATGAGTCCTG---GAGCATCATTTGCACAACGTCTCATAGCTTTTGCATG 60001 | ||||||| | || || | | ||||| |||| || || || ||||| Sbjct 218380 TCTCAAGTGGATCTCTGATGAGCGATCGACCTTTGCCGAACGACTAATCGCCTTTGCCGC 218439 Query 60002 CGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGG 60061 ||| || || ||||||||||| || || ||| | | || |||||||| || |||||||| Sbjct 218440 CGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTGAAGAAGCGTGG 218499 Query 60062 CCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 |||||||| || ||| |||||||||||||| || ||||| |||||||| || || Sbjct 218500 TCTCATGCCCGGATTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCA 218556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524402319520