Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5 224 1e-53 seq17 100 3e-16 seq15 84.2 2e-11 >seq5 Length=1078720 Score = 224 bits (248), Expect = 1e-53 Identities = 463/682 (68%), Gaps = 14/682 (2%) Strand=Plus/Plus Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353 || |||||||||||||| |||| |||||||||| || ||||| || || ||| | Sbjct 587224 CTTTTCAACGCTGGTACTCCTCACGCTCAGATGTCTTCATGTTTCCTCGTCGCCATGCGG 587283 Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413 |||||||| || || ||||||||||| || |||||| ||||| || ||||||||| Sbjct 587284 GATGACTCTATTGAGGGCATCTACGACACTCTCAAGACCTGTGCTCAGATCTCCAAGACC 587343 Query 53414 TCGGGTGGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGG 53473 | |||||||| ||| ||||| | ||| ||||||| || || || || || Sbjct 587344 GCCGGTGGTATTGGTCTCCACATCCACAACATCCGTGCCAAGGGTTCATACATTGCCGGC 587403 Query 53474 ACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGG 53533 || |||||| | | | || ||||| || ||||| || | ||| || ||| || || Sbjct 587404 ACCAACGGCTACTCTAACGGTATCGTCCCCATGCTGCGAGCCTTTGACGCCACAGCTCGT 587463 Query 53534 TACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGG 53593 |||||| |||| |||||| |||||| || | || ||||||||||| ||||| ||| Sbjct 587464 TACGTCGACCAAGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCTTGG 587523 Query 53594 CACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGC 53653 || ||||| | | || || || || ||||| ||| || || | || || | || Sbjct 587524 CATGCCGATGTCTTCGACTTCCTGGACTTGCGTAAGAACCACGGAAAAGAGGAAGTCCGA 587583 Query 53654 TGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAA 53712 | ||| |||| ||| || || |||||||| || ||||||||| || ||| ||| Sbjct 587584 GCAAGAGACTTGTTCTAC-GCCCTTTGGATTCCCGATCTCTTCATG--AAGCGTGTCGAA 587640 Query 53713 --GGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTAC 53770 |||| || ||| |||||||| ||| ||||||||| |||||| | |||| || Sbjct 587641 TCCGACGGCGACTGGACTCTGATGTGTCCGGCCGAGTGCCCAGGCCTCGCCGATGTCCAC 587700 Query 53771 GGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG----AA 53826 || |||||| | || | || | |||||| || | ||||| || | || Sbjct 587701 TCCGAAGAGTTTGAAAAGCTCTACGAGTCGTACG-AG---AAGGCCGGTAAGGGTCGCAA 587756 Query 53827 GAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAAC 53886 || |||| || | | | ||| ||| |||||| || || ||||| || | Sbjct 587757 GACCATCAAAGCCCAGAAACTTTGGTTTGCCATCCTCGAGGCTCAAACCGAGACCGGTAA 587816 Query 53887 GCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGT 53946 || | |||| ||||||||| | | ||| | ||| ||||||| | | |||| Sbjct 587817 CCCCTTCATGCTTTACAAGGATGCTGCCAATGCCAAGTCCAACCAGCAACATCTCGGTAC 587876 Query 53947 CATCAAATCGAGCAACTTATGT 53968 ||||||||||| ||||| ||| Sbjct 587877 TATCAAATCGAGTAACTTGTGT 587898 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 55727 CTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGT 55786 ||||||| || ||| ||| ||||||||||| | |||||| | || ||| | | Sbjct 588744 CTCAAGGCTATCTACAAGACCGTGTGGGAGATCTCCCAGAAGGCCGTCATCGACCTTGCT 588803 Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 || || |||||||| | ||||||||||||||| || ||||||||| | | ||| || Sbjct 588804 GCCGACCGTGGTGCTTTCATCGACCAGTCCCAATCCCTGAACATCCATCTTGCGAACCCA 588863 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 || | || |||||| ||| |||||||| ||||| |||||||||||||| ||||| || Sbjct 588864 TCCTTCTCCCAGTTGACCTCCATGCACTTCTACGGTTGGAAGAAGGGACTGAAGACTGGG 588923 Query 55907 ATGTACTATCTGCGGACC 55924 ||||| || ||||| Sbjct 588924 TGCTACTACTTGAGGACC 588941 >seq17 Length=442779 Score = 100 bits (110), Expect = 3e-16 Identities = 172/250 (69%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 117342 CAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCA 117401 |||||| || ||||||||||| ||||| || || | || || | ||||||| ||| | Sbjct 94930 CAGCAATTCGTGTACCGAATTGGCCACTTGGATCAAGCAGATTGACGTTGTTGCTGCCAA 94871 Query 117402 CAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACG 117461 |||| || |||||||| |||||| || | | ||| ||| || ||||| || | Sbjct 94870 CAAAATTCTGAGCCAAACCGACAATAGTGGAATACAAACTCTGCTCTCCGTGGTGGTATG 94811 Query 117462 CCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCT 117521 |||||| ||| | || || || || || ||||| ||||| || || ||| || || Sbjct 94810 CCGTCTTCTCGGAAACATATCCAGCGAGTTGAGCGACCTTGATCTCCTTCGTGAGATTAC 94751 Query 117522 TCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAG 117581 ||||| ||| | | | || || || || | || || || ||||| |||| | || Sbjct 94750 GCTTGAAGCATCCGAAGAGGACTTTCCGTTGGCCGGGTTTAAGCCCATCAGCCATGGAAG 94691 Query 117582 GGATCGAACG 117591 |||| || || Sbjct 94690 GGATTGATCG 94681 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 152074 CGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTC 152133 || || || || || ||| || || || || |||| ||||||| ||| || |||||| Sbjct 94922 CGTGTACCGAATTGGCCACTTGGATCAAGCAGATTGACGTTGTTGCTGCCAACAAAATTC 94863 Query 152134 TGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGC 152193 ||||||||| ||||| ||| | || |||| || |||||||| || ||||||| | Sbjct 94862 TGAGCCAAACCGACAATAGTGGAATACAAACTCTGCTCTCCGTGGTGGTATGCCGTCTTC 94803 Query 152194 TCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGA 152251 || | | ||||| || | || || ||||| || ||| |||| || || ||||| Sbjct 94802 TCGGAAACATATCCAGCGAGTTGAGCGACCTTGATCTCCTTCGTGAGATTACGCTTGA 94745 >seq15 Length=579413 Score = 84.2 bits (92), Expect = 2e-11 Identities = 173/253 (68%), Gaps = 7/253 (3%) Strand=Plus/Minus Query 74808 CCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAG 74867 || ||||| || ||||||||||||| ||| ||||||| | ||||||||| ||||||| Sbjct 218511 CCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAG 218452 Query 74868 ATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCG----GAAGT 74923 || || || || |||||||||| || |||| || || ||| |||| || Sbjct 218451 ATACCCTCAACGGCGGCAAAGGCGATTAGTCGTT-CGGCAAAGGTCGATCGCTCATCAGA 218393 Query 74924 CATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTT 74982 ||||| | ||||||| | || |||| | | ||| |||| || ||||| |||| Sbjct 218392 GATCCACTTGAGAGCCCAGTTGGC-TTTCTTGGCAATGCAGGGGATGGTGTCGATGGCTT 218334 Query 74983 GGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACG 75042 ||||||| | | |||| ||||||| | |||| |||| || ||||| | Sbjct 218333 CGAAGAGGTAAGTCCGGCGGGCGGGGTCCTTGATGTAGGTGTCGATCAGGAGGGAGTAGG 218274 Query 75043 TCTCCGAATGAAT 75055 |||| || || || Sbjct 218273 TCTCAGAGTGGAT 218261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215603268400