Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq5 203 4e-47 seq15 194 2e-44 seq1 138 1e-27 seq7 87.8 2e-12 seq4 87.8 2e-12 seq12 84.2 2e-11 >seq5 Length=1078720 Score = 203 bits (224), Expect = 4e-47 Identities = 429/637 (67%), Gaps = 5/637 (1%) Strand=Plus/Minus Query 80904 CAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGT 80963 |||||| |||| ||||| || || ||||| |||| | | |||| | |||||| || Sbjct 587958 CAGGGATGCCAAGTTGCAAACAGCGACCTCATCAGGGGCGGAGTACTCAATGATTTCGGT 587899 Query 80964 GCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGC 81023 ||||| ||| || || || ||||| || | || |||||| |||||||| ||| ||| Sbjct 587898 ACACAAGTTACTCGATTTGATAGTACCGAGATGTTGCTGGTTGGACTTGGCATTGGCAGC 587839 Query 81024 GTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCA 81083 |||||||| |||| | ||| ||||||||||| || | || ||||||||| ||| Sbjct 587838 ATCCTTGTAAAGCATGAAGGGGTTACCGGTCTCGGTTTGAGCCTCGAGGATGGCAAACCA 587779 Query 81084 AATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AG 81142 || | | || |||| |||||| || || | | | ||| |||| || Sbjct 587778 AAGTTTCTGGGCTTTGATGGTCTTGCGACCCTTACCGGCCTTCTCGTACGACTCGTAGAG 587719 Query 81143 CTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCA 81202 ||| || |||| | ||| | || | |||| ||||||||||| || ||||||| Sbjct 587718 CTTT-TCAAACTCTTCGGAGTGGACATCGGCGAGGCCTGGGCACTCGGCCGGACACATCA 587660 Query 81203 GGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGG 81262 | ||||||| |||| || ||| ||||||||| || || ||||| |||||| Sbjct 587659 GAGTCCAGTCGCCGTCGGATTCGACACGCTTCATGAAGAGATCGGGAATCCAAAGGGCGT 587600 Query 81263 TGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGT 81322 ||||| ||| | || | ||||| | || ||||| ||||| || || |||| Sbjct 587599 AGAACAAGTCTCTTGCTCGGACTTCCTCTTTTCCGTGGTTCTTACGCAAGTCCAGGAAGT 587540 Query 81323 CCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACGG---C 81379 | | || || |||||||| ||||| || || | ||| | | || ||| | | Sbjct 587539 CGAAGACATCGGCATGCCAAGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTAC 587480 Query 81380 CACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCAT 81439 |||| |||| ||||||||| || || |||| ||| | |||| ||| |||| |||||| | Sbjct 587479 CACCTTGGTCGACGTAACGAGCTGTGGCGTCAAAGGCTCGCAGCATGGGGACGATACCGT 587420 Query 81440 CTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAA 81499 || | ||||| || || | || || |||||||| || | ||| ||| | Sbjct 587419 TAGAGTAGCCGTTGGTGCCGGCAATGTATGAACCCTTGGCACGGATGTTGTGGATGTGGA 587360 Query 81500 GACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536 |||| || ||||| | ||| || ||||||||||| Sbjct 587359 GACCAATACCACCGGCGGTCTTGGAGATCTGAGCACA 587323 >seq15 Length=579413 Score = 194 bits (214), Expect = 2e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| |||||||| ||||| |||||||||||||| ||||| Sbjct 38094 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATTACTCTTGAGGTGGAGTCTTCG 38035 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| |||| | ||||| |||||||||||||| || || ||||||||| Sbjct 38034 GATACCATAGACAATGTGAAATCCAAAATCCAGGACAAGGAGGGTATCCCCCCAGACCAG 37975 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| | ||||||| || || | | ||||| ||| Sbjct 37974 CAGCGTCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGGCGCACTTTGTCGGACTACAAT 37915 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || |||||||| ||| ||||||| || ||||| Sbjct 37914 ATCCAGAAGGAGTCTACACTTCATCTTGTCCTGCGTCTCCGTGGTGG 37868 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| |||||||| ||||| || ||||||||||||||||| | Sbjct 38322 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAGGTTGAGTCTTCT 38263 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| |||| | || ||||||||||| ||||| || || |||||||| Sbjct 38262 GACACCATCGACAATGTGAAATCGAAGATTCAGGACAAAGAGGGTATCCCCCCAGACCAA 38203 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || || || | || ||||| | ||||| ||| Sbjct 38202 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTCTCGGACTACAAT 38143 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || ||||| | ||| | ||||| || ||||| Sbjct 38142 ATCCAGAAAGAGTCGACGCTTCACTTGGTCCTCCGTCTCCGTGGTGG 38096 Score = 152 bits (168), Expect = 6e-32 Identities = 140/177 (79%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| || ||||| |||||||||||||| || ||||| ||||| ||||| Sbjct 38599 AATGCAAATCTTCGTTAAGACCCTTACCGGCAAGACCATCACTCTGGAGGTCGAGTCCTC 38540 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | || | ||| | || ||||||||||||||||| |||||||||||||| Sbjct 38539 AGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCA 38480 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 |||||| | ||||| ||||| ||||| || ||||| | || ||||| | ||||| Sbjct 38479 ACAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGACGGACGAACCCTGTCCGACTA 38423 Score = 143 bits (158), Expect = 3e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || || || ||||| || || || |||||||| || ||||| ||| | || ||||| Sbjct 37788 CTAACGGGAAAGACCATCACACTGGAGGTTGAATCGTCTGATACCATCGACAACGTGAAG 37729 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 | ||||| |||||||||||||| ||||| |||||||| ||| | | || ||||| || Sbjct 37728 TCGAAAATCCAGGACAAGGAGGGCATTCCCCCAGACCAACAGAGGTTGATCTTTGCCGGG 37669 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| | ||||||| | || || | ||||| || ||||||| ||||| ||||| Sbjct 37668 AAGCAGTTGGAGGATGGAAGGACTCTTTCGGACTACAACATCCAAAAAGAATCTACTCTA 37609 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 || || ||| | |||||||| |||||||| Sbjct 37608 CACCTTGTCCTCCGTCTTCGTGGTGGACA 37580 >seq1 Length=3245857 Score = 138 bits (152), Expect = 1e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 ||||| ||||| || || || || ||||||||||| || | ||| | || | ||| Sbjct 3091377 CTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCGGACACCATCGACAACGTCAAG 3091436 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 | || || |||||||||||||| || || |||||||| |||||||| || ||||||||| Sbjct 3091437 TCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAACAGCGTCTCATCTTTGCTGGT 3091496 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 || || |||||||||| ||||| || | ||||| || |||| ||||| || || || Sbjct 3091497 AAACAGCTCGAGGATGGACGTACTCTCTCCGACTACAACATCCAGAAGGAGTCTACCCTC 3091556 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || || ||| | | || ||||| Sbjct 3091557 CACCTGGTGTTGAGGTTGCGTGGTGG 3091582 >seq7 Length=1014673 Score = 87.8 bits (96), Expect = 2e-12 Identities = 247/376 (66%), Gaps = 9/376 (2%) Strand=Plus/Plus Query 24718 TCAGATTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCAGGAGACGCCACAGT 24777 || |||| |||||||| ||| ||| ||| || || ||| || || || ||| Sbjct 187363 TCCGATTCTATCAGGCTTCTACCTCTGAATTGTACGGTAAAGTGGTCGAAACCCCGCAGA 187422 Query 24778 CGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACT 24837 | ||||| || ||||| || || | || || || || |||| ||| ||| | || Sbjct 187423 CAGAGACGACCCCATTCTACCCTAGGTCGCCATACGGCGTGGCAAAACTGTACGCATTCT 187482 Query 24838 GGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAACGGAATTCTGTTCA 24897 |||| | || ||||| || | |||| || | |||||||||| |||||||||| Sbjct 187483 GGATCGTCGTCAATTACCGGGAATCATATGGAATGTTCACATGCAACGGGATTCTGTTCA 187542 Query 24898 ACCATGAGTCGGAGCGTCGGGGACCTGAATTTGTTACACGAAAGATTACTCTTGGTATTG 24957 |||| ||||| || || || | |||||| |||||||||||| ||| | | | Sbjct 187543 ACCACGAGTCACCTCGCCGAGGTCGAACATTTGTAACACGAAAGATTTCTCGAGCGGTAG 187602 Query 24958 ACCA-----TTGGATCAAGACAAGGGCACCTATTG-AGCTGGGAAACCTAGATGCCAAAC 25011 | | || | | || || | || |||| | |||| || | || | ||| Sbjct 187603 CCGAAATAGCTGCAGGGAAACTAGAG-AC--ATTGTATTTGGGGAATATCCATTCGAAAA 187659 Query 25012 GTGATTGGGGGCATGCAGCCGACTACGTCGACGCCATGTGGCGCATGCTCCAACAGAATA 25071 | |||||||| ||||| ||||| || || | ||||||| ||||||||||| | | Sbjct 187660 GAGATTGGGGCCATGCTAAAGACTATGTGGAAGGAATGTGGCTGATGCTCCAACAAGACA 187719 Query 25072 AGCCAGAGGATTTTGT 25087 |||| || || || || Sbjct 187720 AGCCGGAAGACTTCGT 187735 >seq4 Length=1370089 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 64738 GTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGC 64797 || || || || |||||||| ||||| || |||| |||||| | || ||||| || Sbjct 447529 GTCGAGGGGATCTTCTTTTCGGGGTCGTTTGCGGCTATATTCTGGTTGAAGAAGCGAGGA 447588 Query 64798 CTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGG 64848 ||||||| ||| || |||||||||||||| ||||| ||| ||||||||| Sbjct 447589 TTGATGCCTGGTTTGACGTTTTCGAACGAGTTGATCAGTCGCGACGAGGGG 447639 >seq12 Length=702644 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || || |||||||| || || || ||||| ||||| || | || | ||| | || Sbjct 574933 CTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCGGACACGATCGACAATGTCAAA 574992 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 | ||||| |||||||| ||||| || || |||||||||||||| | ||||| || || Sbjct 574993 TCCAAAATCCAGGACAAAGAGGGTATCCCCCCAGACCAGCAGCGATTGATTTTCGCCGGG 575052 Query 27547 AAGCAACTCGAGGA 27560 || || |||||||| Sbjct 575053 AAACAGCTCGAGGA 575066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309986524960