Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq15 113 4e-20 >seq15 Length=579413 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||| ||| | ||||||||||| ||||| | || Sbjct 38094 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATTACTCTTGAGGTGGAGTCTTCG 38035 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || ||| ||||| || ||||| || || || || || || || Sbjct 38034 GATACCATAGACAATGTGAAATCCAAAATCCAGGACAAGGAGGGTATCCCCCCAGACCAG 37975 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || ||||| || | || | || || ||||| Sbjct 37974 CAGCGTCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGGCGCACTTTGTCGGACTACAAT 37915 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | ||| | || ||||| | || ||||| || Sbjct 37914 ATCCAGAAGGAGTCTACACTTCATCTTGTCCTGCGTCTCCGTGGTGGTAT 37865 Score = 82.4 bits (90), Expect = 7e-11 Identities = 125/178 (70%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || ||||||||| | || ||||| || || || | || Sbjct 38598 ATGCAAATCTTCGTTAAGACCCTTACCGGCAAGACCATCACTCTGGAGGTCGAGTCCTCA 38539 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || ||||| || || || ||| Sbjct 38538 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAA 38479 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 |||||||| || | ||| || || || | || ||| | ||| | ||||| |||| Sbjct 38478 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGACGGACGAACCCTGTCCGACTACA 38421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918084684160