Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq15 113 4e-20
>seq15
Length=579413
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| ||||| ||| | ||||||||||| ||||| | ||
Sbjct 38094 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATTACTCTTGAGGTGGAGTCTTCG 38035
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || ||| ||||| || ||||| || || || || || || ||
Sbjct 38034 GATACCATAGACAATGTGAAATCCAAAATCCAGGACAAGGAGGGTATCCCCCCAGACCAG 37975
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| || ||||| || | || | || || |||||
Sbjct 37974 CAGCGTCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGGCGCACTTTGTCGGACTACAAT 37915
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | ||| | || ||||| | || ||||| ||
Sbjct 37914 ATCCAGAAGGAGTCTACACTTCATCTTGTCCTGCGTCTCCGTGGTGGTAT 37865
Score = 82.4 bits (90), Expect = 7e-11
Identities = 125/178 (70%), Gaps = 0/178 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || || ||||||||| | || ||||| || || || | ||
Sbjct 38598 ATGCAAATCTTCGTTAAGACCCTTACCGGCAAGACCATCACTCTGGAGGTCGAGTCCTCA 38539
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||| ||||| || ||||| || || || |||
Sbjct 38538 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAA 38479
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165
|||||||| || | ||| || || || | || ||| | ||| | ||||| ||||
Sbjct 38478 CAGCGTTTGATTTTCGCTGGAAAGCAGCTTGAGGACGGACGAACCCTGTCCGACTACA 38421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918084684160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |