Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq15 141 2e-28
seq1 123 6e-23
seq12 84.2 5e-11
>seq15
Length=579413
Score = 141 bits (156), Expect = 2e-28
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||||||||| ||||| ||||||||||||| ||||| || | | |||
Sbjct 37588 ACGAAGACGGAGGACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGAAAGAGT 37647
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| ||||| || | ||||||||| || ||||| | | |||||||| || ||||| ||
Sbjct 37648 CCTTCCATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATGCC 37707
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| ||||| || |||||| |||||||| || || | ||| || || |
Sbjct 37708 CTCCTTGTCCTGGATTTTCGACTTCACGTTGTCGATGGTATCAGACGATTCAACCTCCAG 37767
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| ||||| |||||
Sbjct 37768 TGTGATGGTCTTTCCCGT 37785
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | ||| || || || ||||| |||| |||||| || | | |||| || |||
Sbjct 38111 AGGACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCT 38170
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || |||||||| || || ||||| || |||||
Sbjct 38171 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCC 38230
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| |||||| ||||||||||| || | || || || | ||||| |||
Sbjct 38231 TGAATCTTCGATTTCACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTC 38290
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||| || | ||| | |||||
Sbjct 38291 TTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38322
Score = 116 bits (128), Expect = 9e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 225533 CATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTT 225592
|| |||| |||| || |||| || || || |||||||| |||||||| || | || |
Sbjct 38418 CACTGTAGTCGGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCT 38477
Query 225593 GTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGT 225652
||||||| || ||||| || |||||||| || ||||| ||| || ||||||||||
Sbjct 38478 GTTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGT 38537
Query 225653 CTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCA 225712
|||||| || || || | ||||| |||||||| || | || || | ||| | |||||
Sbjct 38538 CTGAGGACTCGACCTCCAGAGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCA 38597
Query 225713 TT 225714
||
Sbjct 38598 TT 38599
Score = 104 bits (114), Expect = 6e-17
Identities = 119/160 (74%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 225533 CATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTT 225592
|| |||| || | || ||| | || || || || ||||| || |||||||| |||||||
Sbjct 38701 CACTGTAGTCAGACAGAGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATGAGTCGTT 38760
Query 225593 GTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGT 225652
| || || || |||||||| || |||||||||||||| ||| || || |||||||
Sbjct 38761 GCTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGT 38820
Query 225653 CTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAA 225692
| || | ||| || || | ||||| ||||| || |||||
Sbjct 38821 CCGAAGATTCAACTTCGAGGGTGATGGTCTTTCCGGTCAA 38860
>seq1
Length=3245857
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558
|||| || |||||||| || || || || |||| ||||| |||| | ||| | |||
Sbjct 3091570 CTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCA 3091511
Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618
|| || ||||| || ||||| ||||| || || |||||||| || || ||||| ||||||
Sbjct 3091510 TCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTG 3091451
Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678
|| |||||||| ||| || ||||||||||| || | || || || | |||||
Sbjct 3091450 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATG 3091391
Query 225679 GTCTTGCCCGT 225689
|| ||||||||
Sbjct 3091390 GTTTTGCCCGT 3091380
>seq12
Length=702644
Score = 84.2 bits (92), Expect = 5e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 225549 AGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608
||| || || || || ||||| ||||| ||||| || | ||| || ||||| || || ||
Sbjct 575076 AGTCCTGCCGTCCTCGAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGGAT 575017
Query 225609 ACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTC 225668
||| || ||||| ||||| || || ||| ||||| ||||| || | || || ||
Sbjct 575016 ACCCTCTTTGTCCTGGATTTTGGATTTGACATTGTCGATCGTGTCCGAAGACTCGACCTC 574957
Query 225669 TAACGTGATCGTCTTGCCCGT 225689
| ||||| |||||||||||
Sbjct 574956 GAGGGTGATGGTCTTGCCCGT 574936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530313800252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |