Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq15 152 1e-31 seq1 91.5 3e-13 >seq15 Length=579413 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||||||||| |||||||| || ||||| ||||| || | ||||| | |||||| Sbjct 37883 AGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCCATCC 37942 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || ||||||||||| || | ||||||||| | | ||| || ||||| || Sbjct 37943 TCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 38002 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||| ||| | |||| | | || ||| ||| || ||||||||||| || Sbjct 38003 TGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACCTCAAGAGTAATGGTC 38062 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| ||||||| |||||| Sbjct 38063 TTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094 Score = 127 bits (140), Expect = 5e-24 Identities = 162/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | ||||| || |||||||| ||||| ||||| || | | |||| Sbjct 38104 GAGACGGAGGACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCG 38163 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || ||||| ||||||||||| || | ||| ||||| | | ||| || Sbjct 38164 GCCGTCTTCCAGCTGCTTT--CCGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCC 38221 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || ||||| || ||| ||| | || | | |||| ||| ||| || |||||| Sbjct 38222 TCTTTGTCCTGAATCTTCGATTTCACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGA 38281 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || |||||||| ||||||| |||||| Sbjct 38282 GTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38322 Score = 93.3 bits (102), Expect = 1e-13 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || |||||||| ||||||||||||||||| || | | ||| || ||||| Sbjct 37597 GAGGACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTCCTTCCATC 37656 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || | |||||||| ||||| | |||||| ||||| | | || || ||||| || Sbjct 37657 CTCCAACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATGCCCTCCTTGTC 37716 Query 152012 TTGAATTTT 152020 || ||||| Sbjct 37717 CTGGATTTT 37725 >seq1 Length=3245857 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || || || || |||||||| || ||||||||||| |||| | ||| | ||||| || Sbjct 3091564 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCATCCTCG 3091505 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || ||| || || ||||| || | ||| ||||| | | ||| || ||||| || || Sbjct 3091504 AGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTGTCCTGG 3091445 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || ||||| | || | | |||| ||| ||| || || || || || |||||| Sbjct 3091444 ATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTG 3091385 Query 152076 CCCGTGAG 152083 ||||| || Sbjct 3091384 CCCGTAAG 3091377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819942566918