Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq15 152 1e-31
seq1 91.5 3e-13
>seq15
Length=579413
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||||||||| |||||||| || ||||| ||||| || | ||||| | ||||||
Sbjct 37883 AGGACAAGATGAAGTGTAGACTCCTTCTGGATATTGTAGTCCGACAAAGTGCGCCCATCC 37942
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| | || ||||||||||| || | ||||||||| | | ||| || ||||| ||
Sbjct 37943 TCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 38002
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| ||||| ||| ||| | |||| | | || ||| ||| || ||||||||||| ||
Sbjct 38003 TGGATTTTGGATTTCACATTGTCTATGGTATCCGAAGACTCCACCTCAAGAGTAATGGTC 38062
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || |||||||| ||||||| ||||||
Sbjct 38063 TTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38094
Score = 127 bits (140), Expect = 5e-24
Identities = 162/221 (73%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | ||||| || |||||||| ||||| ||||| || | | ||||
Sbjct 38104 GAGACGGAGGACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCG 38163
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| ||||| || ||||| ||||||||||| || | ||| ||||| | | ||| ||
Sbjct 38164 GCCGTCTTCCAGCTGCTTT--CCGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCC 38221
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
|| || || ||||| || ||| ||| | || | | |||| ||| ||| || ||||||
Sbjct 38222 TCTTTGTCCTGAATCTTCGATTTCACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGA 38281
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || |||||||| ||||||| ||||||
Sbjct 38282 GTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 38322
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| || |||||||| ||||||||||||||||| || | | ||| || |||||
Sbjct 37597 GAGGACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTCCTTCCATC 37656
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| | |||||||| ||||| | |||||| ||||| | | || || ||||| ||
Sbjct 37657 CTCCAACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATGCCCTCCTTGTC 37716
Query 152012 TTGAATTTT 152020
|| |||||
Sbjct 37717 CTGGATTTT 37725
>seq1
Length=3245857
Score = 91.5 bits (100), Expect = 3e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| || || || |||||||| || ||||||||||| |||| | ||| | ||||| ||
Sbjct 3091564 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCATCCTCG 3091505
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
|| ||| || || ||||| || | ||| ||||| | | ||| || ||||| || ||
Sbjct 3091504 AGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTGTCCTGG 3091445
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
|| || ||||| | || | | |||| ||| ||| || || || || || ||||||
Sbjct 3091444 ATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTG 3091385
Query 152076 CCCGTGAG 152083
||||| ||
Sbjct 3091384 CCCGTAAG 3091377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153819942566918
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |