Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03-
01] 58 sequences; 20,788,256 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq15 125 5e-24
seq1 100 2e-16
>seq15
Length=579413
Score = 125 bits (138), Expect = 5e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||||||||| ||| || ||||| ||||| || | ||| || |||| |||
Sbjct 38114 ACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCC 38173
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||||| |||||| || |||| || | ||| || || |||
Sbjct 38174 AGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCCTGA 38233
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| |||| | | |||||||| | || || ||||| | || || ||||||
Sbjct 38234 ATCTTCGATTTCACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTT 38293
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || ||||| |||||||| |||||
Sbjct 38294 CCGGTAAGAGTCTTGACGAAGATCTGCAT 38322
Score = 107 bits (118), Expect = 1e-18
Identities = 118/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 44181 CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCT 44240
|||| || |||||||| || || || ||||||||||| || |||| ||| | || ||||
Sbjct 38442 CGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATGCCCTCCT 38501
Query 44241 TTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAA 44300
| ||| ||||| ||| | | | |||||||| | ||| || ||||||| || |
Sbjct 38502 TGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGACTCGACCTCCAGAGTGA 38561
Query 44301 TCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| || || |||||||| ||||||||||||||
Sbjct 38562 TGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCAT 38598
Score = 93.3 bits (102), Expect = 3e-14
Identities = 134/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || || |||||||||||||| || | || | | || |||
Sbjct 37601 ACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTCCTTCCATCCTCC 37660
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
| ||||||||||||||||||||| | ||| || |||| || | || ||||| |||
Sbjct 37661 AACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 37720
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|| ||| ||||| | | ||||| || | ||||| ||||||| || || ||||||
Sbjct 37721 ATTTTCGACTTCACGTTGTCGATGGTATCAGACGATTCAACCTCCAGTGTGATGGTCTTT 37780
Query 44309 CCCGTGAGG 44317
||||| |||
Sbjct 37781 CCCGTTAGG 37789
>seq1
Length=3245857
Score = 100 bits (110), Expect = 2e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 44123 CTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCG 44182
|||||||||||||| || || |||||| ||||||||||| |||| ||| || |
Sbjct 3091570 CTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCA 3091511
Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242
|| || ||||| || || |||||||| | |||||| || |||| || | ||| |||||
Sbjct 3091510 TCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTG 3091451
Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302
||| ||||| ||| | | | |||||||| | || || ||||| | || ||
Sbjct 3091450 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATG 3091391
Query 44303 GTCTTTCCCGTGAGG 44317
|| || ||||| |||
Sbjct 3091390 GTTTTGCCCGTAAGG 3091376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990145531786
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |