Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeotremella_20skinneri_20[genbank_20GCA_5F001599695.1_202016-03- 01] 58 sequences; 20,788,256 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq15 125 5e-24 seq1 100 2e-16 >seq15 Length=579413 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||||||| ||| || ||||| ||||| || | ||| || |||| ||| Sbjct 38114 ACCAAGTGAAGCGTCGACTCTTTCTGGATATTGTAGTCCGAGAGGGTTCGGCCGTCTTCC 38173 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||| |||||| || |||| || | ||| || || ||| Sbjct 38174 AGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGGATACCCTCTTTGTCCTGA 38233 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| |||| | | |||||||| | || || ||||| | || || |||||| Sbjct 38234 ATCTTCGATTTCACATTGTCGATGGTGTCAGAAGACTCAACCTCAAGAGTGATGGTCTTT 38293 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| |||||||| ||||| Sbjct 38294 CCGGTAAGAGTCTTGACGAAGATCTGCAT 38322 Score = 107 bits (118), Expect = 1e-18 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 44181 CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCT 44240 |||| || |||||||| || || || ||||||||||| || |||| ||| | || |||| Sbjct 38442 CGTCCTCAAGCTGCTTTCCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATGCCCTCCT 38501 Query 44241 TTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAA 44300 | ||| ||||| ||| | | | |||||||| | ||| || ||||||| || | Sbjct 38502 TGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCTGAGGACTCGACCTCCAGAGTGA 38561 Query 44301 TCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| || || |||||||| |||||||||||||| Sbjct 38562 TGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCAT 38598 Score = 93.3 bits (102), Expect = 3e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || || |||||||||||||| || | || | | || ||| Sbjct 37601 ACAAGGTGTAGAGTAGATTCTTTTTGGATGTTGTAGTCCGAAAGAGTCCTTCCATCCTCC 37660 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||||||||||||||||||||| | ||| || |||| || | || ||||| ||| Sbjct 37661 AACTGCTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 37720 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || ||| ||||| | | ||||| || | ||||| ||||||| || || |||||| Sbjct 37721 ATTTTCGACTTCACGTTGTCGATGGTATCAGACGATTCAACCTCCAGTGTGATGGTCTTT 37780 Query 44309 CCCGTGAGG 44317 ||||| ||| Sbjct 37781 CCCGTTAGG 37789 >seq1 Length=3245857 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 44123 CTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCG 44182 |||||||||||||| || || |||||| ||||||||||| |||| ||| || | Sbjct 3091570 CTCAACACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGTCCA 3091511 Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || || ||||| || || |||||||| | |||||| || |||| || | ||| ||||| Sbjct 3091510 TCCTCGAGCTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGGATACCCTCCTTG 3091451 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 ||| ||||| ||| | | | |||||||| | || || ||||| | || || Sbjct 3091450 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATG 3091391 Query 44303 GTCTTTCCCGTGAGG 44317 || || ||||| ||| Sbjct 3091390 GTTTTGCCCGTAAGG 3091376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990145531786