Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq199 120 3e-22 seq185 113 5e-20 seq20 95.1 1e-14 seq10 87.8 2e-12 >seq199 Length=27799 Score = 120 bits (132), Expect = 3e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 117027 CCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTT 117086 |||| | |||||| ||||| |||||||| ||||| ||||| |||||||||| || | Sbjct 16320 CCTTTGCCGAGCGACTGGTCGCCTTCGCTGCCGTTGAGGGTATCTTCTTTTCTGGATCGT 16261 Query 117087 TCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACG 117146 ||||| | || || ||||||||||| || || |||||||| || |||| || || | Sbjct 16260 TCGCCTCGATCTTCTGGCTCAAGAAGCGAGGACTCATGCCTGGATTGACGTTTTCGAATG 16201 Query 117147 AGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACT 117182 || | ||||| |||||||||||||| || ||||| Sbjct 16200 AGTTGATCTCGAGGGACGAGGGTCTTCACACCGACT 16165 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 116736 AGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACG 116795 |||| || || ||| ||||| ||||||| ||| ||| || || |||| |||| Sbjct 16787 AGCGACACTTTATCTCTCACGTCTTGGCCTTCTTCAGTAGCAGTGATGGAGTCGTGAACG 16728 Query 116796 AGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACG 116855 |||||||| ||||||| ||| | ||||| || ||| |||||||| || ||||| |||| Sbjct 16727 AGAATCTGCTCGAGCGATTCTCCCAGGAAGTACAGTCTGCCGAGGCCCGATGCTTTTACG 16668 Query 116856 GCTTTCAGATC 116866 | || |||||| Sbjct 16667 GATTCCAGATC 16657 >seq185 Length=33376 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGC 40755 || |||||||| || |||||||| || ||||||||| | || || || | | |||| | Sbjct 1587 ATCTTCGTAAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACC 1528 Query 40756 GTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACG 40814 | | |||| |||||| || || | ||||| || || || ||| | || ||||| || Sbjct 1527 ATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCTGATCAGCAGCG 1469 Query 40815 ACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 40874 ||| |||| ||| || || ||||| || || | || ||||| || ||||||||||| Sbjct 1468 ACTTATCTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACCCTTTCGGATTACAACATCCA 1409 Query 40875 GAAGGAGGCCACGCTGCATCTAGT 40898 ||||||| |||| || || || || Sbjct 1408 GAAGGAGTCCACCCTCCACCTCGT 1385 >seq20 Length=177425 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 || ||||| || |||||||| |||| || || | |||| | | | |||| |||| Sbjct 96438 CTTACGGGAAAGACCATCACTCTCGAGGTTGAGTCATCCGATACTATCGACAACG-TCAA 96380 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 || || || | || || ||||| ||||| | || ||||| ||| | |||| ||| || Sbjct 96379 GGCCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATCTTCGCCGG 96320 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 || ||||| || |||| || ||||| ||||||||||||||||||||| | || || Sbjct 96319 AAAGCAGCTTGAGGACGGACGAACCCTGTCGGACTACAACATCCAGAAGGAGTCTACCCT 96260 Query 40890 GCATCTAGT 40898 ||||| || Sbjct 96259 TCATCTCGT 96251 Score = 84.2 bits (92), Expect = 2e-11 Identities = 122/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 || ||||| || |||||||| |||| || || | |||| | | | |||| |||| Sbjct 96802 CTTACGGGAAAGACCATCACTCTCGAGGTTGAGTCATCCGATACTATCGACAACG-TCAA 96744 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 || || || | || || ||||| ||||| | || ||||| ||| | |||| ||| || Sbjct 96743 GGCCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATCTTCGCCGG 96684 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 || ||||| || |||| || ||||| ||||||||||||||||||| Sbjct 96683 AAAGCAGCTTGAGGACGGACGAACCCTGTCGGACTACAACATCCAGAAGG 96634 >seq10 Length=266483 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 40777 ATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAG 40836 |||| ||||| ||||| || ||| | || ||||| |||||||||| ||| || || ||| Sbjct 190775 ATTCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGACTCATCTTCGCCGGAAAGCAG 190716 Query 40837 CTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 || || |||| || ||||| ||||||||||||||||||| Sbjct 190715 CTTGAGGACGGACGAACCCTTTCGGACTACAACATCCAGAAGG 190673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515216978117200