Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq199 107 3e-18 seq106 93.3 6e-14 >seq199 Length=27799 Score = 107 bits (118), Expect = 3e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 125418 GCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCG 125477 ||||| ||||||| || ||||| ||||| ||||| ||||||||||| || || || Sbjct 16315 GCCGAGCGACTGGTCGCCTTCGCTGCCGTTGAGGGTATCTTCTTTTCTGGATCGTTCGCC 16256 Query 125478 GCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTT 125537 | ||||| |||||||||||||| ||||||||||| ||| ||||| || ||||| Sbjct 16255 TCGATCTTCTGGCTCAAGAAGCGAGGACTCATGCCTGGATTGACGTTTTCGAATGAGTTG 16196 Query 125538 ATATCTCGAGACGAGGGCCTACAC 125561 || || | |||||||| || ||| Sbjct 16195 ATCTCGAGGGACGAGGGTCTTCAC 16172 >seq106 Length=59458 Score = 93.3 bits (102), Expect = 6e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 70063 AGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGT 70122 |||||||||||| || || || ||||| ||||| ||| | |||| || | | ||||| Sbjct 33842 AGAGGGCGATCTCGGTCCCGTCTACGGCTTCCAATGGCGTCACTTTGGAGCAGAATATGT 33783 Query 70123 AGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATT-GCAGACAATCATTGACA 70181 || ||| |||| |||||| ||| | ||||| || ||||| || ||| ||| |||| Sbjct 33782 CGATTGCAAGACCGACTATCGCGGTAAAGGTGTCGACCAATTGGCCGAC-TGCATAGACA 33724 Query 70182 CTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATT 70241 |||||| |||||| || |||||||| ||| | | | | ||||| || |||| || Sbjct 33723 AGATCAAGAACAATCCTACGGATAGGAGAATCATCCTCTCAGCCTGGAACCCAGCAGGTT 33664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056004182200