Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq140 95.1 2e-15 seq344 93.3 7e-15 seq27 86.0 1e-12 >seq140 Length=46235 Score = 95.1 bits (104), Expect = 2e-15 Identities = 112/149 (75%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | |||| ||||||||||| ||||| || ||||||||||| || || Sbjct 45405 GCCAAGCGACACCGAAAGATC-CTTCGAGATAATATCCAGGGTATCACCAAGCCTGCCAT 45347 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || || || || |||||||||||||| | || || | | || || |||| Sbjct 45346 CCGACGACTTGCGCGACGAGGTGGAGTCAAGCGAATTTCCGGCCTTATTTACGAGGAGAC 45287 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGA 16580 || | |||| | ||| | |||||| ||| Sbjct 45286 CCGAGGTGTTCTCAAGCTGTTCCTCGAGA 45258 >seq344 Length=2116 Score = 93.3 bits (102), Expect = 7e-15 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| |||| || || || |||||||| || ||||||||||| || | Sbjct 1078 CGCCAAGCGACACCGCAAGATC-CTCCGTGACAACATCCAGGGGATCACCAAGCCGGCGA 1136 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| || || || || || || ||||||||||| ||||||| | |||| || |||| Sbjct 1137 TCCGACGACTTGCCCGACGAGGAGGAGTCAAGCGGATCTCTGGGCTCATCTACGAGGAGA 1196 Query 16551 TTCGTGATGTTTTGAAGATCTTCCT 16575 || | ||| | ||| | ||||| Sbjct 1197 CCCGGGGTGTGCTCAAGCTGTTCCT 1221 >seq27 Length=152803 Score = 86.0 bits (94), Expect = 1e-12 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| |||||||||||||||||| || || || ||||| || || Sbjct 122996 GCCAAGCGACACCGAAAGAT-TCTTCGAGATAACATCCAGGGTATTACTAAGCCTGCCAT 122938 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || || || || |||||||||||||| | || || | |||| || |||| Sbjct 122937 CCGACGACTTGCGCGACGAGGTGGAGTCAAGCGAATTTCCGGTCTCATCTACGAGGAGAC 122878 Query 16552 TCGTGATGTTTTGAAGATCTTCCT 16575 || | ||| | ||| | ||||| Sbjct 122877 CCGAGGTGTCCTCAAGTTGTTCCT 122854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074884564085