Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq46 374 1e-98 seq20 165 1e-35 seq10 93.3 6e-14 >seq46 Length=116485 Score = 374 bits (414), Expect = 1e-98 Identities = 774/1147 (67%), Gaps = 6/1147 (1%) Strand=Plus/Plus Query 195732 ACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACT 195791 |||||| || || || |||||||| || ||||| || | | || || || || ||| Sbjct 60360 ACTTCAACGACTCCCAGCGACAGGCTACCAAGGATGCCGGAGTCATCGCCGGACTTAACG 60419 Query 195792 GTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACA 195851 ||| |||| ||||| || || || || || || || ||||| ||||| |||||||| Sbjct 60420 TTCTCCGAATCATCAACGAGCCTACCGCCGCCGCCATCGCTTACGGTCTTGACAAGAAGG 60479 Query 195852 AGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCAC 195911 || || || || || | ||||| ||||| || || || || || |||||||| | Sbjct 60480 TCATCGGTGAGAAGAACGTTCTCATCTTCGATCTTGGAGGAGGAACCTTCGATGTCTCCC 60539 Query 195912 TTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAG 195971 |||| | || || | ||||| ||||| || ||| | ||||| || || || || | | Sbjct 60540 TTCTTACCATCGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCGGAGACACCCACTTGG 60599 Query 195972 GTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTT-GTCTGATGAGTTCCGTCGAAAG 196030 | || || || |||||| || ||| || || || ||| | |||||| |||||| Sbjct 60600 GAGGAGAGGACTTCGATAACCGACTTGTCAACCACTTCGTCC-AGGAGTTCAAGCGAAAG 60658 Query 196031 AATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAA 196090 || ||||| || || | ||||| || | |||||||| || || | || || ||||| Sbjct 60659 AACAAGAAGGACATCACCGGAAACCCCCGAGCTCTTCGACGACTCCGAACCGCCTGTGAG 60718 Query 196091 CGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTT 196150 || || || ||||| ||||||||| | || || || | | ||||| || || | || Sbjct 60719 CGAGCTAAGCGAACCCTCTCTTCTGCCGCCCAGACCACCATCGAGATCGACTCCCTCTTC 60778 Query 196151 GACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGAT 196210 ||||||||||||||||| || | | || || || || || || ||| | | ||| Sbjct 60779 GACGGAATTGACTTCTACACTTCCCTCACTCGAGCTCGATTCGAGGAGCTCTGCCAGGAT 60838 Query 196211 TTGTT--TAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATA 196268 | || ||||| ||||| || || || | || || || || |||||||| | Sbjct 60839 CTCTTCCGAGGAA--CCATGGATCCCGTCGAGAAGGTCCTGAAGGATGCCAAGATGGACA 60896 Query 196269 AGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAAC 196328 |||| | || | || |||||||| || |||||||| || || || || ||||| || Sbjct 60897 AGTCCACTGTCCACGAGATTGTCCTCGTCGGAGGATCCACTCGAATCCCCAAGATCCAGA 60956 Query 196329 AGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAG 196388 || | | ||| ||||||| || || ||||| | || ||||| ||||| | Sbjct 60957 AGCTTGTCTCTGACTTCTTCTCCGGAAAGGAGCCCAACAAGTCCATTAACCCTGATGAGG 61016 Query 196389 CAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACG 196448 | |||||||| || || ||||| ||||| || |||||||| || | | | | | || Sbjct 61017 CTGTTGCTTACGGAGCCGCCGTCCAGGCCGCCATTCTCTCTGGAGATACCTCTGAGAAGA 61076 Query 196449 TCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTG 196508 ||| || | || || || |||||||| || | ||| ||| |||| || || || | Sbjct 61077 CCCAGGACTTGCTCCTCCTCGATGTTGCCCCTCTTTCCACTGGTATTGAGACCGCTGGAG 61136 Query 196509 GTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCT 196568 ||||| | ||| | || | | ||||| || |||| || |||||| | ||| Sbjct 61137 GTGTTTTCACTGCTTTGATCAAGCGAAACACCACCGTTCCTACCAAGAAGTCCGAGATCT 61196 Query 196569 TTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCT 196628 | || || || | || || || || || |||| ||| || || | || ||||| || Sbjct 61197 TCTCCACTTACGCTGACAACCAGCCCGGAGTTCTTATCCAGGTCTTCGAGGGAGAGCGAG 61256 Query 196629 CCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCAC 196688 |||| | ||||| ||| | | || |||| ||||| | | || || || |||| | Sbjct 61257 CCCGAACTAAGGACAACAACTTGCTCGGAAAGTTCGAGCTTTCTGGTATCCCCCCTGCGC 61316 Query 196689 CCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACG 196748 || |||| ||||| ||||| | || |||||| || || || || || | |||| Sbjct 61317 CCCGAGGAGTTCCCCAGATCGAGGTCACCTTCGACATTGATGCCAACTCTATCTTGAACG 61376 Query 196749 TCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGG 196808 || | |||| |||||| | | || || || | ||||| || ||||| || |||| Sbjct 61377 TCTCTGCTGCCGACAAGACCACCGGAAAGTCCAACAAGATCACCATCACCAACGATAAGG 61436 Query 196809 GGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAG 196868 | || || || |||||||| ||||| || ||||| || || || ||||||| ||| | Sbjct 61437 GACGACTCTCCAAGGAGGACATTGAGCGAATGGTCTCCGAGGCTGAGAAGTACAAGGACG 61496 Query 196869 AAGACGA 196875 | || || Sbjct 61497 AGGATGA 61503 >seq20 Length=177425 Score = 165 bits (182), Expect = 1e-35 Identities = 151/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| ||||| || ||||| |||||||||||||| || || || ||||| ||| |||| Sbjct 96438 CTTACGGGAAAGACCATCACTCTCGAGGTTGAGTCATCCGATACTATCGACAACGTCAAG 96379 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 |||||||| || |||||||| || || || || |||||||| ||| | || || || || Sbjct 96378 GCCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATCTTCGCCGGA 96319 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTA 172062 || |||||||| || ||||| ||||| | || |||||| | || ||||||||||| || Sbjct 96318 AAGCAGCTTGAGGACGGACGAACCCTGTCGGACTACAACATCCAGAAGGAGTCTACCCTT 96259 Query 172063 CACCTTGTTCT 172073 || || ||||| Sbjct 96258 CATCTCGTTCT 96248 Score = 143 bits (158), Expect = 4e-29 Identities = 133/169 (79%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||||| ||||| || ||||| |||||||||||||| || || || ||||| ||| |||| Sbjct 96802 CTTACGGGAAAGACCATCACTCTCGAGGTTGAGTCATCCGATACTATCGACAACGTCAAG 96743 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 |||||||| || |||||||| || || || || |||||||| ||| | || || || || Sbjct 96742 GCCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATCTTCGCCGGA 96683 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGG 172051 || |||||||| || ||||| ||||| | || |||||| | || |||| Sbjct 96682 AAGCAGCTTGAGGACGGACGAACCCTGTCGGACTACAACATCCAGAAGG 96634 >seq10 Length=266483 Score = 93.3 bits (102), Expect = 6e-14 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || |||||||| || || || |||||||||||||| ||||| || Sbjct 191374 ATGCAGATCTTCGTCAAGACCCTTACAGGGAAGACCATCACCCTCGAGGTGGAGTCTTCG 191315 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTC 171952 ||||| ||||| ||| |||| |||||| ||| Sbjct 191314 GACACCATCGACAACGTCAAGGCCAAGGTTC 191284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657859562968400