Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq169 122 1e-21 seq267 114 2e-19 seq32 107 2e-17 seq35 95.1 1e-13 seq199 91.5 2e-12 seq15 87.8 2e-11 >seq169 Length=37379 Score = 122 bits (134), Expect = 1e-21 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| || || ||| | | ||||| || ||||||||||||||||| || | | Sbjct 31262 GCTTGGAAAGCTCTCCGGGTAGGATCAATCGGACGGCGGTCTGGATCTCTCGAGAAGAAA 31203 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||||| |||||| | |||| || ||||||| | ||| || |||| | Sbjct 31202 TCGTGGACTTCTTGTTGTACGAAGCCAACTTGCTGGCCTCGCCGGCGACTCGCTCGAAGA 31143 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | |||||||| || ||||| | || ||||| | |||||||||||| || |||||||| Sbjct 31142 TATCGTTGACGAAAGAGTTAAGGATAGACATGGCCTTGTTGGAGATACCAGTGTCGGGGT 31083 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | ||||||||||| |||||||| ||| | |||||||| Sbjct 31082 GGACCTGCTTGAGGACCTTGTAAATGTAAGACGAGTA 31046 >seq267 Length=9573 Score = 114 bits (126), Expect = 2e-19 Identities = 158/220 (72%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| || || ||| | | ||||| || ||||| |||||||| || || | || Sbjct 8085 GCTTGGAGAGCTCTCCGGGGAGGATCAATCGAACGGCAGTCTGGATTTCTCGGGAAGAGA 8144 Query 1254403 TCGTG---TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 |||| || |||| ||| |||| || |||||| | ||| || || | Sbjct 8145 TCGTCGACTTTTTGTTGTACGAA---GCCAACTTGCTGGCCTCACCGGCGACTCGCTCAA 8201 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 ||||||||||| || ||||| | || ||||| | |||||||||||| || ||||| Sbjct 8202 AGATGTCGTTGACGAAAGAGTTGAGGATAGACATGGCCTTGTTGGAGATACCAGTGTCGG 8261 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||| ||||||||||| |||||||||||| |||||||||| Sbjct 8262 GGTGGACCTGCTTGAGGACCTTGTAGATGTACGACGAGTA 8301 >seq32 Length=140166 Score = 107 bits (118), Expect = 2e-17 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| || || ||| | | ||||| || |||||||||||||| || || | || Sbjct 138884 GCTTGGAAAGCTCTCCGGGAAGGATCAATCGGACGGCGGTCTGGATTTCTCGGGAAGAGA 138943 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| |||||| | |||| || |||||| | ||| || |||| | Sbjct 138944 TCGTTGACTTCTTGTTGTATGAAGCCAACTTGCTGGCCTCACCGGCGACTCGCTCGAAAA 139003 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | |||||||| || ||||| | || ||||| | |||||||||||| || |||||||| Sbjct 139004 TATCGTTGACGAAAGAGTTGAGGATAGACATGGCCTTGTTGGAGATACCAGTGTCGGGGT 139063 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | ||||||||||| |||||||| ||| | || ||||| Sbjct 139064 GGACCTGCTTGAGGACCTTGTAAATGTAGGAAGAGTA 139100 >seq35 Length=134259 Score = 95.1 bits (104), Expect = 1e-13 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1630201 TTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGGCCTTC 1630260 |||||||| | |||||||||||||| || ||||| || ||||||||||| || ||| | Sbjct 7148 TTGGAGATCATGGCGCACTGTTTGAGAGTATCGTAAATACCCTCGATCGAATCATCCTGC 7207 Query 1630261 ATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCGGCGTTGAAGAGC 1630317 ||| |||| | ||||| ||||| || ||||| | || ||||||||||| ||| Sbjct 7208 ATGGCCACCAAGAAGCAAGACGAAAGCTGGGGGTGAGGAGTACCGGCGTTGAATAGC 7264 >seq199 Length=27799 Score = 91.5 bits (100), Expect = 2e-12 Identities = 115/154 (75%), Gaps = 8/154 (5%) Strand=Plus/Plus Query 869219 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAG 869278 || |||||||| || |||||||||||||| ||||| | | ||| || || || ||| Sbjct 16218 CCAGGCATGAGTCCTCGCTTCTTGAGCCAGAAGATCGAGGCGAACGATCCAGAAAAGAAG 16277 Query 869279 ATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG 869338 || ||||| ||||| || ||| ||| || |||||||||||| ||||||| || | | Sbjct 16278 ATACCCTCAACGGCAGCGAAGGCGACCAGTCGCTCGGCAAAG--GTCGAGG---TCTTGG 16332 Query 869339 TTG--ATCCACTTCATCGCCCAGTCGGCCTTTTT 869370 | |||||||| | |||||||| ||||||| Sbjct 16333 ACGAAATCCACTTTAGAGCCCAGTC-ACCTTTTT 16365 >seq15 Length=214213 Score = 87.8 bits (96), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 19098 CTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATC 19157 || || ||||| |||||||||||||| ||||| ||||||||| |||||||| || || Sbjct 168518 CTGGGAGAGCCCTGCTTTGACAAGATGGAGGCTTTGCTCGCCCATGCCATGCTCTCCATT 168577 Query 19158 CCGGCCACCAAGGGATTCGAGATTGG 19183 || ||||||||| ||||||||||| Sbjct 168578 CCTTCCACCAAGGCTTTCGAGATTGG 168603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107110887684365