Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq169 158 2e-32 seq32 149 1e-29 seq267 136 6e-26 >seq169 Length=37379 Score = 158 bits (174), Expect = 2e-32 Identities = 189/254 (74%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 ||||||| || | |||||||||||| |||| |||||| ||| || || ||| | | || Sbjct 31298 ACTTGGTAACTGACTTGGTACCCTCCGAGATAGCGTGCTTGGAAAGCTCTCCGGGTAGGA 31239 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC- 1485591 ||| || ||||||||||||||||| || | |||||| |||||| || || Sbjct 31238 TCAATCGGACGGCGGTCTGGATCTCTCGAGAAGAAATCGTGGACTTCTTGTT-GTACGAA 31180 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||| || ||||||| | ||| || |||| || |||||||| || ||||| | | Sbjct 31179 GCCAACTTGCTGGCCTCGCCGGCGACTCGCTCGAAGATATCGTTGACGAAAGAGTTAAGG 31120 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||||| | ||||||||||| || ||||||||| ||||||||||| ||||||||| Sbjct 31119 ATAGACATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGACCTTGTAA 31060 Query 1485712 ACAAAGGACGAGTA 1485725 | | |||||||| Sbjct 31059 ATGTAAGACGAGTA 31046 >seq32 Length=140166 Score = 149 bits (164), Expect = 1e-29 Identities = 187/254 (74%), Gaps = 2/254 (1%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| | |||||| ||||| || | ||||||| ||| || || ||| | | || Sbjct 138848 ACTTGGTGACCGACTTGGTTCCCTCCGAAATGGCGTGCTTGGAAAGCTCTCCGGGAAGGA 138907 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC- 1485591 ||| || |||||||||||||| || |||| |||||| |||||| || | Sbjct 138908 TCAATCGGACGGCGGTCTGGATTTCTCGGGAAGAGATCGTTGACTTCTTGTT-GTATGAA 138966 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||| || |||||| | ||| || |||| || |||||||| || ||||| | | Sbjct 138967 GCCAACTTGCTGGCCTCACCGGCGACTCGCTCGAAAATATCGTTGACGAAAGAGTTGAGG 139026 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||||| | ||||||||||| || ||||||||| ||||||||||| ||||||||| Sbjct 139027 ATAGACATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGACCTTGTAA 139086 Query 1485712 ACAAAGGACGAGTA 1485725 | |||| ||||| Sbjct 139087 ATGTAGGAAGAGTA 139100 >seq267 Length=9573 Score = 136 bits (150), Expect = 6e-26 Identities = 183/252 (73%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534 ||||| || | |||||| ||||| |||| ||||||| ||| || || ||| | | |||| Sbjct 8051 TTGGTCACAGACTTGGTTCCCTCCGAGATGGCGTGCTTGGAGAGCTCTCCGGGGAGGATC 8110 Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC-GC 1485593 | || ||||| |||||||| || |||| |||||| ||||| || || || Sbjct 8111 AATCGAACGGCAGTCTGGATTTCTCGGGAAGAGATCGTCGACTTTTTGTT-GTACGAAGC 8169 Query 1485594 CAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAT 1485653 || || |||||| | ||| || || | ||||||||||| || ||||| | ||| Sbjct 8170 CAACTTGCTGGCCTCACCGGCGACTCGCTCAAAGATGTCGTTGACGAAAGAGTTGAGGAT 8229 Query 1485654 CGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713 ||||| | ||||||||||| || ||||||||| ||||||||||| |||||||| | Sbjct 8230 AGACATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGACCTTGTAGAT 8289 Query 1485714 AAAGGACGAGTA 1485725 | |||||||| Sbjct 8290 GTACGACGAGTA 8301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916209700776455