Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq169 122 1e-21 seq267 113 6e-19 seq32 113 6e-19 seq199 89.7 7e-12 seq35 89.7 7e-12 >seq169 Length=37379 Score = 122 bits (134), Expect = 1e-21 Identities = 174/244 (71%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||||| | || |||||||| ||||||||||| |||||| || | | ||| Sbjct 31046 TACTCGTCTTACATTTACAAGGTCCTCAAGCAGGTCCACCCCGACACTGGT-----ATC- 31099 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| | ||||| || |||||||| || |||| || ||| | Sbjct 31100 TCCAACAAGGCCATGTCTATCCTTAACTCTTTCGTCAACGATATCTTCGAGCGAGTCGCC 31159 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 ||||||| | |||| | ||||||| |||||| | || |||||| Sbjct 31160 GGCGAGGCCAGCAAGTTGGCTTCGTACAACAAGAAGTCCACGATTTCTTCTCGAGAGATC 31219 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||||||||| || ||||| | | ||| || || ||| |||||| |||| ||||| Sbjct 31220 CAGACCGCCGTCCGATTGATCCTACCCGGAGAGCTTTCCAAGCACGCTATCTCGGAGGGT 31279 Query 725139 ACCA 725142 |||| Sbjct 31280 ACCA 31283 >seq267 Length=9573 Score = 113 bits (124), Expect = 6e-19 Identities = 172/244 (70%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||||| | ||||||||||| ||||||||||| |||||| || | | ||| Sbjct 8301 TACTCGTCGTACATCTACAAGGTCCTCAAGCAGGTCCACCCCGACACTGGT-----ATC- 8248 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| | ||||| || ||||||||||| | || || ||| | Sbjct 8247 TCCAACAAGGCCATGTCTATCCTCAACTCTTTCGTCAACGACATCTTTGAGCGAGTCGCC 8188 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 |||||| | |||| | |||||| |||||| | || || ||| Sbjct 8187 GGTGAGGCCAGCAAGTTGGCTTCGTACAACAAAAAGTCGACGATCTCTTCCCGAGAAATC 8128 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||| ||||| || ||||| | | ||| || || ||| ||||||| |||| ||||| Sbjct 8127 CAGACTGCCGTTCGATTGATCCTCCCCGGAGAGCTCTCCAAGCACGCCATCTCGGAGGGA 8068 Query 725139 ACCA 725142 |||| Sbjct 8067 ACCA 8064 >seq32 Length=140166 Score = 113 bits (124), Expect = 6e-19 Identities = 172/244 (70%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| |||| || |||||||| ||||||||||| |||||| || | | ||| Sbjct 139100 TACTCTTCCTACATTTACAAGGTCCTCAAGCAGGTCCACCCCGACACTGGT-----ATC- 139047 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| | ||||| || |||||||| || |||| || ||| | Sbjct 139046 TCCAACAAGGCCATGTCTATCCTCAACTCTTTCGTCAACGATATTTTCGAGCGAGTCGCC 138987 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 |||||| | |||| | ||||||| |||||| | || || ||| Sbjct 138986 GGTGAGGCCAGCAAGTTGGCTTCATACAACAAGAAGTCAACGATCTCTTCCCGAGAAATC 138927 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||||||||| || ||||| | | ||| || || ||| ||||||| | || ||||| Sbjct 138926 CAGACCGCCGTCCGATTGATCCTTCCCGGAGAGCTTTCCAAGCACGCCATTTCGGAGGGA 138867 Query 725139 ACCA 725142 |||| Sbjct 138866 ACCA 138863 >seq199 Length=27799 Score = 89.7 bits (98), Expect = 7e-12 Identities = 115/153 (75%), Gaps = 8/153 (5%) Strand=Plus/Minus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGAT--CAACAAGGAGGGCCTCGACACTTTGCCGA 1456180 ||||||| |||||||| | |||||||| | | | || ||||||| ||||||||| Sbjct 16365 AAAAAGGT-GACTGGGCTCTAAAGTGGATTTCGTCCAAGA---CCTCGAC-CTTTGCCGA 16311 Query 1456181 GCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCAT 1456239 ||| || |||| ||| || || || ||||| ||||| || || || ||| | | || Sbjct 16310 GCGACTGGTCGCCTTCGCTGCCGTTGAGGGTATCTTCTTTTCTGGATCGTTCGCCTCGAT 16251 Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 ||| |||||||||||||| || |||||||| || Sbjct 16250 CTTCTGGCTCAAGAAGCGAGGACTCATGCCTGG 16218 >seq35 Length=134259 Score = 89.7 bits (98), Expect = 7e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 259930 GCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAA 259989 ||| || || ||||| || || | ||| ||| |||||| ||||| || ||| |||| | Sbjct 7264 GCTATTCAACGCCGGTACTCCTCACCCCCAGCTTTCGTCTTGCTTCTTGGTGGCCATGCA 7205 Query 259990 GGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAA 260046 || |||||||||||||| || || || || ||||| |||||||| | |||||||| Sbjct 7204 GGATGATTCGATCGAGGGTATTTACGATACTCTCAAACAGTGCGCCATGATCTCCAA 7148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177777924115890