Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq20 105 7e-18 seq185 100 3e-16 >seq20 Length=177425 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||| |||||| | ||||| || || || || ||||| || ||||||||||| Sbjct 96233 CCTCCTCGGAGTCGAAGAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAC 96292 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || ||||| || || || || ||||| ||||||||||| || || Sbjct 96293 AGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGATCAGGAGGG 96352 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | || ||||| || || || Sbjct 96353 ATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTATCGGATGACTCAACC 96412 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 |||||||| ||||| || || || Sbjct 96413 TCGAGAGTGATGGTCTTTCCCGT 96435 >seq185 Length=33376 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || ||||| ||||| || |||||||| || || ||| | || ||| Sbjct 1385 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGGCCATCCTCG 1444 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || || | ||||||||||| || || || ||||| || || || Sbjct 1445 AGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGAATTCCTTCCTTGTCCTGG 1504 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | ||||| || || ||||| || || || ||||| ||| Sbjct 1505 ATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTA 1564 Query 134685 CCGGTTAAAGTTTTAACGAAAAT 134707 || || | || || ||||| || Sbjct 1565 CCCGTGAGGGTCTTTACGAAGAT 1587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396220469400