Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq20 131 5e-25 seq185 127 6e-24 >seq20 Length=177425 Score = 131 bits (144), Expect = 5e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 140500 TATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATAT 140559 || ||||| || || || | || ||||| |||||||| |||||||| || || || | Sbjct 96222 TAGTTTACTGCCCTCCTCGGAGTCGAAGAACGAGATGAAGGGTAGACTCCTTCTGGATGT 96281 Query 140560 TATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCT 140619 | || || || | ||||| || || ||||| || ||||| || ||||| | || |||| Sbjct 96282 TGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCT 96341 Query 140620 GATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAG 140679 |||||||||| || || || |||||||| || || || || || || || || | ||| | Sbjct 96342 GATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTATCGG 96401 Query 140680 ATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAG 140716 ||| ||||| || || || | |||||||| || || Sbjct 96402 ATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAG 96438 Score = 98.7 bits (108), Expect = 3e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || || || || || || || | ||||| || || ||||| || ||||| || ||||| Sbjct 96636 TTCTGGATGTTGTAGTCCGACAGGGTTCGTCCGTCCTCAAGCTGCTTTCCGGCGAAGATC 96695 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 | || |||||||||||||| || || || |||||||| || || || || || || || Sbjct 96696 AATCGCTGCTGATCAGGAGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 96755 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAG 140716 || | ||| |||| ||||| || || || | |||||||| || || Sbjct 96756 ATAGTATCGGATGACTCAACCTCGAGAGTGATGGTCTTTCCCGTAAG 96802 >seq185 Length=33376 Score = 127 bits (140), Expect = 6e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 || || || || || || || || || || || ||||| || || || || ||||| || Sbjct 1367 CCTCCTCGCAACCTAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 1426 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | ||||| ||||| || || || || || || ||||| || || ||||||||||| ||| Sbjct 1427 AGGGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGATCAGGGGGA 1486 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 |||||||| || ||||| || || || || || || || || | ||||| | || || Sbjct 1487 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACC 1546 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCT 140733 ||||| || | ||||| || || || || ||||| || |||| Sbjct 1547 TCAAGGGTGATGGTCTTACCCGTGAGGGTCTTTACGAAGATCT 1589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515247702102035