Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaffia_20rhodozyma_20[genbank_20GCA_5F001579715.1_202016-03-03] 345 sequences; 18,757,695 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq185 143 3e-29 seq20 125 8e-24 seq35 98.7 1e-15 seq199 95.1 1e-14 seq10 87.8 2e-12 >seq185 Length=33376 Score = 143 bits (158), Expect = 3e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27412 ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGC 27471 ||||| || ||||| || || || ||||| || || |||||||| ||||| ||| | | Sbjct 1587 ATCTTCGTAAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACC 1528 Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531 || | || | ||||| || || ||||||||||| |||||||| || || |||||||| Sbjct 1527 ATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCTGATCAGCAGCGA 1468 Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591 || || || || |||||||| |||||||||| || ||||| | || || || |||| Sbjct 1467 CTTATCTTCGCCGGTAAGCAGCTCGAGGATGGCCGAACCCTTTCGGATTACAACATCCAG 1408 Query 27592 AAGGAATCCACTCTTCATCTAGTC 27615 ||||| ||||| || || || ||| Sbjct 1407 AAGGAGTCCACCCTCCACCTCGTC 1384 >seq20 Length=177425 Score = 125 bits (138), Expect = 8e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 ||||| || ||||| || ||||| |||||||||||| |||| || | || | ||| Sbjct 96438 CTTACGGGAAAGACCATCACTCTCGAGGTTGAGTCATCCGATACTATCGACAACGTCAAG 96379 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 || || || ||||| |||||||| || ||||| || |||||||| | || || || || Sbjct 96378 GCCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATCTTCGCCGGA 96319 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| || ||||| | || ||||| | ||||| || |||| ||||| || || ||| Sbjct 96318 AAGCAGCTTGAGGACGGACGAACCCTGTCGGACTACAACATCCAGAAGGAGTCTACCCTT 96259 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 ||||| || | || || || || || || Sbjct 96258 CATCTCGTTCTTCGACTCCGAGGAGGGCA 96230 Score = 107 bits (118), Expect = 2e-18 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 ||||| || ||||| || ||||| |||||||||||| |||| || | || | ||| Sbjct 96802 CTTACGGGAAAGACCATCACTCTCGAGGTTGAGTCATCCGATACTATCGACAACGTCAAG 96743 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 || || || ||||| |||||||| || ||||| || |||||||| | || || || || Sbjct 96742 GCCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAGCAGCGATTGATCTTCGCCGGA 96683 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595 ||||| || ||||| | || ||||| | ||||| || |||| |||| Sbjct 96682 AAGCAGCTTGAGGACGGACGAACCCTGTCGGACTACAACATCCAGAAGG 96634 >seq35 Length=134259 Score = 98.7 bits (108), Expect = 1e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 81026 CCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAA 81085 ||||||||||||| |||| ||||||||| ||| |||| |||||||||| ||| | Sbjct 6411 CCTTGTAGCACATAAACGGTCCACCGGTCTCAGTCTGAGACTCCAGGATGGCGTACCAGA 6470 Query 81086 TCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTT 81145 || | || || ||||| |||||||||||||| | | ||||| || | Sbjct 6471 CCTTTTGAGCAGAAACAACCTTTCGGAATTTGCCTTCTCGCTCGTACTTCTCGAACAAGG 6530 Query 81146 CGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGT 81205 | ||||||| | | |||| || || | | | | |||||||||||||||||||| || Sbjct 6531 CTTCGAACTCGTCTCCGTAAACCTCGGACAAGCCGGGGCACTCGTTAGGGCACATAAGCG 6590 Query 81206 GCCAGTC 81212 ||||||| Sbjct 6591 GCCAGTC 6597 >seq199 Length=27799 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 64738 GTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGC 64797 || || || || ||||||||||| || ||| || || |||||||| || ||||| || Sbjct 16288 GTTGAGGGTATCTTCTTTTCTGGATCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGAGGA 16229 Query 64798 CTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCAC 64854 || ||||| || || |||||||||| ||| ||||||| |||||||||| || ||| Sbjct 16228 CTCATGCCTGGATTGACGTTTTCGAATGAGTTGATCTCGAGGGACGAGGGTCTTCAC 16172 >seq10 Length=266483 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 ||||||||||||||||||||||| || || |||||||| || || || || || ||||| Sbjct 190775 ATTCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGACTCATCTTCGCCGGAAAGCAG 190716 Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595 || ||||| | || ||||| | ||||| || |||| |||| Sbjct 190715 CTTGAGGACGGACGAACCCTTTCGGACTACAACATCCAGAAGG 190673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307940536400